Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc153085g00002 ATGGAAGGCATGAAGAGTGATAGAAAGGCATCTTGGGGTAAGCTTGTTGGCCGTGTTGATTCCCTCAATTTGGAGGCTGCAAGAATTCCTTCCACCCATCGCCATTTGGTAAGTTGGAGAACAACATTGAGCCTAGCATTTCAAAGCATAGGGGTGATATATGGGGACATTGGAACATCACCACTGTATGTGTATGCAAGTACATTCACAGATGGTATAAACAACACTGATGATCTTCTTGGATGCCTCTCTCTCATCATATATACCATTGCACTCATTCCCTTTCTTAAGTATATTTGTATCGTTTTGTGGGCTAACGACAACGGTGATGGTGGCACATTTGCACTGTACTCTTTGATTTGCCGTTATTCTAAGGTGAGCTTAATTCCAAATCATCAGCCAGAAGATATGCAACTTTCCAATTACAAACTGGAAACACCATCAAACCAGTTAAAGAGAGCACAAAAGATTAAGCATAAGCTAGAGAACAGTAAATTCGCTCAGCTTCTGCTTTTCGTTGTGACTATCATGTCAACCTCTATGGTCATCGGAGATGGAATACTCACACCATCCATTTCAGTACTCTCTGCAATCAGTGGGATCAAATCAAAGAGTGAATCACTTGGGCAAGGTGCTGTTGTGGGGATCTCAATAGCAATCTTGATAATTCTCTTCTCTGTCCAAAGATATGGCACTGATAAAGTGGGCTCAGCGTTTGCGCCGATGATCCTTGTGTGGTTTTCATTCATTGGTGGCATAGGCCTCTACAACTTGTTCAAATATGATGTTGGTGTGCTCCGAGCTTTGAATCCAAAATACATTGTAGATTACTTCAGAAGGAATGGTAAAAAGGGATGGATTTCTCTTGGTGGAATTTTTCTATGCATTACAGGGACTGAGGCCATGTTTGCAGACTTGGGTCACTTCAATGTACGAGCAGTTCAACTTAGTTTCTCCTTTATTACATTTCCTGCACTAGTGTGTGCATACAGTGGACAAGCTGCATATCTCAGTAAATTCCCTGACCATGTGGCGAATACATTCTATGACTCAATACCCAGTCCAATATATTGGCCAACATTTGTTGTGGCAGTTGCTGCTGCCATCATTGCTAGCCAGGCTATGATTTCAGGGGCATATTCTATTATCCAGCAGTCTCTAAGTTTGGGATGCTTCCCTAGTGTTAGTGTCATACATACCTCTGCTAAGTATCACGGTCAGGTTTACATACCTGAGATCAACTACATTCTCATGATAGCTTGCGTCACAGTCACCGCCGCCTTCCGAACCACAGATAATATTGGCCATGCTTATGGGATTGCTGTGGGCATGGTAATGCTTGTGACAACAGGCATGGTTGCTCTTATAATGCTTGTTATATGGAAGACAAGTATATGGTGGATTGTTCTTTTTGTTGTGGTATTTGGTTCAGTGGAGATTGTGTATTTATCATCCATGCTAACTAAGTTCATTCAAGGAGGCCTTCTTCCCTTAGTGCTAGCTTTGTTCTTGATGTCTATCATGGCCACTTGGCATTACACACACAAAAAGAGGTATATGTTTGAAGCCAACAACAAGGTATCTAGCGAATATCTAAGAGAAATAGTAAGCAAACAAGTTCTATCCAGAATACCTGGAGTAGCACTTCTATACTCAGAGCTAGTTGAAGGAGTTCCACCGATATTTGCTAAAGTTGTTGCCAACATACCTCATATCCACTCTGTTGTTGTGTTCGTTTCCATGAAGTCCATCCCTATTAGCAGAGTCGCATTAGAGGAGAGATTCCTTTTCAGACAAGTCCAGCCAAAGGAATATAGGATGTTCCGCTGTGTGGTGAGGTATGGCTACAATGATGTGATTGGGGAACCAAAAGAGTTTGAGGAACAATTAGTTCAACAGCTAAAAGAGTTTATAAGACATCAAAATTTTTCTCATGTGAACGAGGGAGTGGGAGCTGGTGATGCTGAGGAAACAGATCAACATTTGCAAGTGAGTAGCCAACAACAACAATCCAGCAGTGAACGTTCTGCTAAGGATGGAAAAGGTTCTTCTAATCGAATAATACCTGCACCTATTTCTTCAAATCAAGTGGAAGACCAAGTGGTACAGTCTCAATCTGGTCAACAGCATCCAAGGTCTAACCCTGCCATAAATGTGTCCCGTGCTTCATCAGGTTCCATTCAATCATTTGGAGCAGTTAGTAGAATCTCAAACCCAACTCTGCAGGGAATAGAAGAGGAGATAGCATTTGTGCAGAAAGCAATGGAGAAAAGTGTGGTCTACATGTTAGGAGAAGCTGAGGTGGTGGCAGAACCCAACTCGTCCATTTTTAAGAAAATAGTGGTCAATCATATCTACGACTTCTTGAGGAGAAACTTCAGGCATGGAGAACATCTAATGGCAATCCCACGTTCAAAGCTACTCAGGATTGGAATGACATATGAGATATGA 2451 0.419 MEGMKSDRKASWGKLVGRVDSLNLEAARIPSTHRHLVSWRTTLSLAFQSIGVIYGDIGTSPLYVYASTFTDGINNTDDLLGCLSLIIYTIALIPFLKYICIVLWANDNGDGGTFALYSLICRYSKVSLIPNHQPEDMQLSNYKLETPSNQLKRAQKIKHKLENSKFAQLLLFVVTIMSTSMVIGDGILTPSISVLSAISGIKSKSESLGQGAVVGISIAILIILFSVQRYGTDKVGSAFAPMILVWFSFIGGIGLYNLFKYDVGVLRALNPKYIVDYFRRNGKKGWISLGGIFLCITGTEAMFADLGHFNVRAVQLSFSFITFPALVCAYSGQAAYLSKFPDHVANTFYDSIPSPIYWPTFVVAVAAAIIASQAMISGAYSIIQQSLSLGCFPSVSVIHTSAKYHGQVYIPEINYILMIACVTVTAAFRTTDNIGHAYGIAVGMVMLVTTGMVALIMLVIWKTSIWWIVLFVVVFGSVEIVYLSSMLTKFIQGGLLPLVLALFLMSIMATWHYTHKKRYMFEANNKVSSEYLREIVSKQVLSRIPGVALLYSELVEGVPPIFAKVVANIPHIHSVVVFVSMKSIPISRVALEERFLFRQVQPKEYRMFRCVVRYGYNDVIGEPKEFEEQLVQQLKEFIRHQNFSHVNEGVGAGDAEETDQHLQVSSQQQQSSSERSAKDGKGSSNRIIPAPISSNQVEDQVVQSQSGQQHPRSNPAINVSRASSGSIQSFGAVSRISNPTLQGIEEEIAFVQKAMEKSVVYMLGEAEVVAEPNSSIFKKIVVNHIYDFLRRNFRHGEHLMAIPRSKLLRIGMTYEI 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc153085g00002 816 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 37 815 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc153085g00002 816 NCBIfam potassium uptake protein 45 816 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc153085g00002 816 MobiDBLite consensus disorder prediction 687 722 - -
Stsc153085g00002 816 MobiDBLite consensus disorder prediction 648 722 - -
Stsc153085g00002 816 Pfam K+ potassium transporter 46 618 IPR003855 GO:0015079|GO:0016020|GO:0071805
Stsc153085g00002 816 MobiDBLite consensus disorder prediction 659 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc153085g00002 Stsc-Chr153085 4099 8201 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc153085g00002 2 816 Inorganic Solute Cotransporters AT4G13420 58.752 0.0 980
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc153085g00002 K03549 - cave:132178497 1067.76