Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc153053g00001 ATGGCTAATAGAGCTTATCAAGGATCACCATATCCACTCCATAATATGAATTTGGATGAGCTTTTGAGAGGTGGAATAATTGATGAGAGTAGACATGTTGCGCAAAACCATTGTTCAACGTTTTCATCCAATAATTCTTCATTTCTTTTCAACACGTCATCTTCAATGGACAACAACAACCACCACCACTTGCAACAACCAAATTTAGGGGATGCAACAACCTTTGAAGAGATTCTTGCCCGTGCTGAAATGATCAATCATAATAGCAGTAATAATGATTACAATGTTGGAAACCAAGACAATGTTCTTGTAGACACTAAGCCTTTAATTGGTGTTGCTGATCCAATAGTCATGGCTTCTCATCATCAAGCTAATTGGCTGCAAATGCAATTTCCTTCCATGCAACAACATCATCAAGAGAACTTGTGTCAAGATAGTTTTGATTCAAAGCCAGTTGTTGAGAATCCAGTGATGGAAACTCACTACTCTAATTCATTGCTTGGGATTTCGATGCCGGTGGCTGCCACGACATCATCCACATGTTCAGATTCAACGGAAGTTGCTGCTGCTGGTGGCGGCCCCAGCCGCCGAGGTCGGAAGAGAGGGTTCTCGAATGAGTTGCAAAAACAGAACATTGACAGGAGGCAGAAGAGAATGGCGAAGAACCGAGAATCTGCTGCTAAGTCAAGAGCAAAGAAGCAGGCCTATATAGAAAAGTTAGAGAATGACAAGTCTCGGTTGCTGAAATCAAACACATGGCTCAAGAAGCTGATG 774 0.4199 MANRAYQGSPYPLHNMNLDELLRGGIIDESRHVAQNHCSTFSSNNSSFLFNTSSSMDNNNHHHLQQPNLGDATTFEEILARAEMINHNSSNNDYNVGNQDNVLVDTKPLIGVADPIVMASHHQANWLQMQFPSMQQHHQENLCQDSFDSKPVVENPVMETHYSNSLLGISMPVAATTSSTCSDSTEVAAAGGGPSRRGRKRGFSNELQKQNIDRRQKRMAKNRESAAKSRAKKQAYIEKLENDKSRLLKSNTWLKKLM 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc153053g00001 258 MobiDBLite consensus disorder prediction 199 232 - -
Stsc153053g00001 258 MobiDBLite consensus disorder prediction 184 232 - -
Stsc153053g00001 258 Pfam bZIP transcription factor 213 256 IPR004827 GO:0003700|GO:0006355
Stsc153053g00001 258 CDD bZIP_plant_BZIP46 214 257 - -
Stsc153053g00001 258 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 11 257 IPR043452 GO:0003700|GO:0045893
Stsc153053g00001 258 Gene3D - 213 258 - -
Stsc153053g00001 258 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 212 258 IPR004827 GO:0003700|GO:0006355
Stsc153053g00001 258 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 217 232 IPR004827 GO:0003700|GO:0006355
Stsc153053g00001 258 SUPERFAMILY Leucine zipper domain 214 256 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc153053g00001 Stsc-Chr153053 3429 4951 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc153053g00001 12 257 bZIP Transcription Factor Family AT2G41070 28.740 4.91e-15 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc153053g00001 bZIP_1 1.4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc153053g00001 K14432 - qsa:O6P43_019692 138.272