Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc153024g00002 ATGGGGTTTTTGCTGAAAGAAGCTTTGAAGACTCTGTGCAGTCGGAATCAGTGGTCATATGCTGTTTTCTGGAAGATCGGTTGCAACAATTCAAAATTATTGATCTGGGAAGAATGCTATTATGAACCATTGCCATGTTCTTTCCCTCAACCGAATTTCGGGACGTCTAATTTGCCTTACCAGAATGGAGAAGGAAGCTGGTTTTCTTCTGAGTCTCAGTCGTCTCAGATGGGGATCCAAGAGGAGGACAGAGTTTGTTCTTTGATTAACAAAATGACAGTGAATAATTCAGTCAATGTCGCAGGTGAAGGAATAATTGGACGAGCTGCATTTACTGGCAACCATCAGTGGATTCTTTTGAACAATTTCAGTAGAGATGCATATCCACCAGAGGTATATGCTGAGATGCATCACCAACTTACAGCTGGAATGCAGACTGTTGCAGTGATTCCTGTGCTTCCCCATGGGGTTGTTCAACTTGGATCTTTCTTTCCGGTAATGGAGAATATTGGGTTCATAACTGATGTAAAGAGCTTGATCTTGCAACTGGGATGCATTCCCGGTGCCCTTCTATCCGAAGACTATTCAGGAAATCCATCCATTGGAAGAGCACTTGCTACTGGTGGCATGCCTGTCTCTGTCGAACCACCTGCAATTCCCTCGCATTGCATTCCGTCAGTAGCTAATGGCTCGAATGAGCAAAGTAACCCGTCTCATGTTTCAAGGTCAACTGTTCAAACACTCTGTCCTATAAGGGGAGAAATGAATAACTTTCAAGGTTCAGTGTTGACTCCCAAAACCCATAACCTGAGCCAGATATCAAATGGTCATTGCCAACCGAAATCTACTACATTGATTACAACAAACTTTGCTGGCCAAAGTGAGAACAGGGCTGTGGAGCCTGAAGCGAAACCCCCAAACAGAGGTTCATGCCTACATCAGCATTCTGGTTCATATAATGCAAGGTTTGCATTCAATGGCTTATCCAGTTTCACTCAATCAGTTCCAAGCGATTGCAATCTAAAATATATGGAGCAACAAATGATGGCAGTCCTTGGGAGTCAAGGTCACACTAATCCTAGTATAAATGTGTCGAGTACATTAAACATGTCCCAACTAAAGACAGATGGAGGCCATATACTTGATCACAATCAAAGTTCTAGAAGTACTTCGTTACTTGATGGAATACCGATACATGGTGGGGTGAGTAGTCTTTTGAGGACAAATCTTGCTGCTGATTCTGGTTTAAGAACTCCAGATGTGTCTGTTGGTGATTTATCTGGAGCACAAGGGTCTGGGGTTGGAATTAAAAATGATGGTTCAAGTAAAGCAGGTGGTTATTCTCTGGCTAATTTGATTAGTCATTCAAGTGCCTTTACTGTGCCTCCACAAGGTTTTGATCAGAAGCTTCTCTCTGTAGATGTGAAGCATGTTCATGATGCTTTACCTTCAACTGATCAACTGAAAGGGAGTAGTTTGCATCAGTCCCCTAACATCTCTATTCATCTACAGAAGCATGTGACTAATGGTGGTCAAACCCCTGGTTTTGTCCAAGATTGCGACAATAAACATGTCACTGGTCAATCTATGGTGAAGAATGTTAAACAAGAACAAGTTTGTGCTCAACCGTCATCAGGTGATGATCTTTTTGATATTCTAGGAGCAGATTTCAAAAACCAACTACTGAGTGGAAACTGGGACAAGTTGTTTGCTGTTGGATCGGAAGCTAAGACAGAAAATATGGATAAAAAGCCAACATGTATGAATATGCAGGGTATGAACCTTGACTGTTCTTCTGCAAATGGAACAATATCAGAGAGTGACATATTTTCTGGGACAGGCACAGACCACCTCTTGGATGCTGTGGTTTCGAAGACCAAGTCTACCATGAAACAGAATTCTGATGACATGTCTTGCAGGACAACTTTGACAAGTAGTACCTGTTCAGTTCCCTCTCGTGCCTACAAGCCGGCTATGCCCGATCAGTTCCAGGGTGGTATGTTTGATTTTCCCAAGAGTGAGGCTAAAGCAGGTACTGTAGAAAATTCCATGAGGTCTGGATGTAATAAGGATGATGGTGGAAAGTGTTCCCAAACTTCTTCTATGTTTGGGTCCCAACTTAGTTCATGGGTTGAGAATAGTAGCAATATGATGCTTGAAAATAGTGTTTCCACTGGATACTCCAAGCGGCCTGAAGAAGTCTCGAAATCAAATCGCAAAAGGCTTAAACCGGGAGAGAATCCTAGGCCTCGGCCTAAGGACCGACAGATGATTCAAGATCGTGTAAAAGAGTTACGTGAAATTGTGCCAAATGGAGCAAAGTGTAGCATAGATGCACTTCTGGAACGTACCATCAAGCATATGCTTTTTTTGCAGAGTGTGACAAAGCATGCTGACAAGCTGAAACAAACTGGGGATTCAAAGGGAGGGGCTACTTGGGCATACGAGGTTGGCTCACAATCAATGGTTTGCCCAATTATAGTTGAGGATCTGAACCATCCTCGTCAGATGCTAGTTGAGATGCTTTGCGAGGAACGAGGTTTCTTTCTGGAAATAGCTGATTTAATCAGAGGATTAGGTCTAACTATACTGAAGGGGGTAATGGAAGCAAAAAATGACAAAATCTGGGCCCGTTTCGCCGTTGAGGCGAACAGGGACATAACAAGGATGGAGATATTTATGTCGCTGGTTCGGCTTTTGGACCAAACCGTGAAGGGAAATGCATCTTCATCGAATGCAGGTGACAACAACATGATGGCTTATCAGTCCTTTCCGCAAGCTACCCAGATTCCGGCAACCGGTAGGCCTAGTAGTTTGCAATGA 2823 0.4322 MGFLLKEALKTLCSRNQWSYAVFWKIGCNNSKLLIWEECYYEPLPCSFPQPNFGTSNLPYQNGEGSWFSSESQSSQMGIQEEDRVCSLINKMTVNNSVNVAGEGIIGRAAFTGNHQWILLNNFSRDAYPPEVYAEMHHQLTAGMQTVAVIPVLPHGVVQLGSFFPVMENIGFITDVKSLILQLGCIPGALLSEDYSGNPSIGRALATGGMPVSVEPPAIPSHCIPSVANGSNEQSNPSHVSRSTVQTLCPIRGEMNNFQGSVLTPKTHNLSQISNGHCQPKSTTLITTNFAGQSENRAVEPEAKPPNRGSCLHQHSGSYNARFAFNGLSSFTQSVPSDCNLKYMEQQMMAVLGSQGHTNPSINVSSTLNMSQLKTDGGHILDHNQSSRSTSLLDGIPIHGGVSSLLRTNLAADSGLRTPDVSVGDLSGAQGSGVGIKNDGSSKAGGYSLANLISHSSAFTVPPQGFDQKLLSVDVKHVHDALPSTDQLKGSSLHQSPNISIHLQKHVTNGGQTPGFVQDCDNKHVTGQSMVKNVKQEQVCAQPSSGDDLFDILGADFKNQLLSGNWDKLFAVGSEAKTENMDKKPTCMNMQGMNLDCSSANGTISESDIFSGTGTDHLLDAVVSKTKSTMKQNSDDMSCRTTLTSSTCSVPSRAYKPAMPDQFQGGMFDFPKSEAKAGTVENSMRSGCNKDDGGKCSQTSSMFGSQLSSWVENSSNMMLENSVSTGYSKRPEEVSKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLERTIKHMLFLQSVTKHADKLKQTGDSKGGATWAYEVGSQSMVCPIIVEDLNHPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEAKNDKIWARFAVEANRDITRMEIFMSLVRLLDQTVKGNASSSNAGDNNMMAYQSFPQATQIPATGRPSSLQ 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc153024g00002 940 CDD bHLH_AtLHW_like 746 809 - -
Stsc153024g00002 940 MobiDBLite consensus disorder prediction 732 757 - -
Stsc153024g00002 940 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 179 IPR025610 -
Stsc153024g00002 940 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 742 791 IPR011598 GO:0046983
Stsc153024g00002 940 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 934 IPR043561 GO:0003700|GO:0006355
Stsc153024g00002 940 MobiDBLite consensus disorder prediction 723 757 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc153024g00002 Stsc-Chr153024 3597 9630 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc153024g00002 522 934 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 49.539 3.15e-110 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc153024g00002 - - aprc:113857443 1185.63