Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152974g00003 ATGTTGAATGCTTATAATTGTGAGAAGCTTAGTTGTTTTCCATCTGCTATCAATTTGCCCTCGCTGGAAACACTCTACCTAAATGGTTGTCGAGAACTCGAGAATTTTCCAGAAATACTACAAGAGATGAAAAATGTAACTATGCTTTTTTTGAATTACACTGGCATAAAAGATTTGCCATGTTCATTTCGTAACCTTTCTGGGTTGGAGCATTTGGATATAAGAGAGAATAAAATGTGTAGGATGCCAAGTGTGGTTGCCATGATGCCACAACTGGTTGAGTTTAATATGGATGGAGGTGACAATAAGGAGGGGAAGGTATCAGGAAAGCAGGAGAAGGAGGGGCTTCAACTTCAAGTTGAAGGAATACTCACTCACTCCCTCTCCTCTTCAAAAGTAGAATCTCTTCATCTCAACAACTGTGAGCTTCCAGATGGTTTTATTCCACTGGCTGTTGCATGGTTTCCCAATGTTACCAAGTTAGACCTAAGAGGCAGTAATTTCACAATCCTTCCTGAATGCATTCAACAATTTCGCTTTCTAAGGAAGCTCAATGTGGATGAATGCGAGCATCTTCGGGAGATTAGAGGGAGTCCACCATGCTTGAGAGACTTCTCAGCAATATACTGCAAATCATTGAGTCACAGGGGCACAATTGCCGATGGTTGTGATGAAGCACTACTTCTTGAGAATGAATGGAATCATGCAAATGTTTCATATAAAGCAAGACGTTTTTATAAGAAGTATGAGCACCATGAGGTCCAAATTGAGTCGATTGCAAAAGAGATTGGATTGCACGTACGGAAGCAAAAGATCAGTAATATCATGCAAGATATCCGATTCATTGATCCATACAAAATGAGAGAAGTAATTATAATGATGATGATGGTGTCAATGGTATTGCCCAACCACAGGAACCAACCTTTGCTCCTCGAAACACGCATTGGTTTGTGGACACTGCTCTTTCTAACACACACTGCTTTGGCCAGCAACACTCTCACTTAG 1005 0.407 MLNAYNCEKLSCFPSAINLPSLETLYLNGCRELENFPEILQEMKNVTMLFLNYTGIKDLPCSFRNLSGLEHLDIRENKMCRMPSVVAMMPQLVEFNMDGGDNKEGKVSGKQEKEGLQLQVEGILTHSLSSSKVESLHLNNCELPDGFIPLAVAWFPNVTKLDLRGSNFTILPECIQQFRFLRKLNVDECEHLREIRGSPPCLRDFSAIYCKSLSHRGTIADGCDEALLLENEWNHANVSYKARRFYKKYEHHEVQIESIAKEIGLHVRKQKISNIMQDIRFIDPYKMREVIIMMMMVSMVLPNHRNQPLLLETRIGLWTLLFLTHTALASNTLT 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152974g00003 334 SUPERFAMILY RNI-like 2 210 - -
Stsc152974g00003 334 Gene3D Ribonuclease Inhibitor 1 117 IPR032675 -
Stsc152974g00003 334 Gene3D Ribonuclease Inhibitor 118 274 IPR032675 -
Stsc152974g00003 334 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 2 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152974g00003 Stsc-Chr152974 5147 6313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152974g00003 1 99 WRKY Transcription Factor Family AT4G12020 38.000 3.72e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152974g00003 - - ahf:112749300 241.891