Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152970g00001 ATGACTCAGTGCAATGAAAATGAAAACAATAATCATGGAAACATCATGGTGGAGGGAAGAAAAGACAGTGTAATTAGAACTTGTCCTACATGTGGTCATCACATCAAATGCCAAGATCAGAGTGGTGGAATTCATGACTTACCTGGACTACCAGCTGGAGTGAAGTTTGATCCAACAGATCAAGAGATTCTTGAACATTTGGAAGCAAAAGTGCGATCTGATATTCATAAGCTTCACCCTTTAATTGATGAGTTCATCCCAACTCTTGAAGGAGAGAATGGAATCTGCTATACTCATCCAGAGAACTTGCCAGGTCAATA 320 0.3969 MTQCNENENNNHGNIMVEGRKDSVIRTCPTCGHHIKCQDQSGGIHDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPENLPGQ 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152970g00001 106 ProSiteProfiles NAC domain profile. 50 106 IPR003441 GO:0003677|GO:0006355
Stsc152970g00001 106 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 23 105 IPR044799 GO:0003700
Stsc152970g00001 106 Pfam No apical meristem (NAM) protein 51 105 IPR003441 GO:0003677|GO:0006355
Stsc152970g00001 106 SUPERFAMILY NAC domain 44 105 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152970g00001 Stsc-Chr152970 589 1711 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152970g00001 26 105 NAC Transcription Factor Family AT4G28500 77.500 7.99e-41 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152970g00001 - - gmx:100797459 208.764