Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152935g00001 ATGGCGGCAGTCACAGCATCGGTCATTGCTTACAAGCTCATGGAGGAGCCACAACCTTTTTCCCTTGCTGATGTTGCTGCTGCTGTTGTTGTTGCTGATGCCACTTCTCCTTCTTCTTCTTCTTCTGCTAATTCTACAGAGACTGGGAATCCATCTGATGCTGTCATCTTCTTTGGTATCAGCATGGTGCTTGGGATTGCCTGCAGGCACATCCTCCGCGGCACCAGAGTCCCTTACACTGTTGCCTTGCTCATCATTGGCATTGCCCTTGGTTCCATAGAGTATGGTACTCATCATCGCCTGGGAAGGATTGGGGATGGAATTCGTATTTGGGCTGACATTGATCCAGAACTTCTGTTGGCCGTTTTTCTTCCTGCTCTCCTTTTTGAGAGCTCATTCTCTATGGAAGTTCACCAGATCAAGAGGTGTATTGCTCAAATGATCTTACTAGCTGGTCCAGGAGTTGTGATTTCAACCTTTTGTCTTGGATCTGTTCTGAAG 501 0.475 MAAVTASVIAYKLMEEPQPFSLADVAAAVVVADATSPSSSSSANSTETGNPSDAVIFFGISMVLGIACRHILRGTRVPYTVALLIIGIALGSIEYGTHHRLGRIGDGIRIWADIDPELLLAVFLPALLFESSFSMEVHQIKRCIAQMILLAGPGVVISTFCLGSVLK 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152935g00001 167 Pfam Sodium/hydrogen exchanger family 57 166 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc152935g00001 167 PANTHER SODIUM/HYDROGEN EXCHANGER 38 165 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152935g00001 51 167 Antiporters AT2G01980 79.487 2.87e-60 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152935g00001 K14726 - qsa:O6P43_026044 211.846