Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152915g00002 ATGAAGAGACTAAGACTGCTTCAGTTTGCAAATGTGCAACTTGTTGGAGACTTTAAATACCTTTCAACAGATCTTCGATGGTTGTGCTGGCATGAATTTCCTTCTGAATATACAAATGCAAACTTTGATCAGGGAAATTTAGTTGCTATTGACTTCAAATATAGCAAACTTGAACTAGTATGGAAGAAGAGTCAGATGATGAAGCAGCTAAAAATTCTCAATCTTAGTCATTCTCAACACTTAACACAAACTCCTGACTTTTCAAATTTGCCCAATCTTGAAAAGTTAATACTCAAATATTGCCCAAAGTTGACTTCGGTTTCTCATACCATTGAACATCTCAAGCAAGTTCTTCTAATCAATTTGAAAGGGTGTTCAGGGCTTCGTGTACTTCCAAAAAGCATTTACAGGTTGAAATCTCTCAAAACTCTTATTCTTTCAGGATGTTCATTGATTGATAAGCTTGAAGAGGGCATAGAACAGATGGAATCATTGGCAACTTTGATGGCGGATAAAACTGCCATAACACAAGTGCCTCATGCACTTCTAAGATTAAAGAGCATTGTGTATATTTCTTTGTGTGACTTTGAAGGATTATCACGCAATGTGTTTCTTCAATCATTTGTTCCCAATAGAAATTCTCAAGGACTATCATCCATCATCAGAGGGCTTCCACAGGTTCAGAACGTTAGGCTGGAGTGTGGTTCACAACTTCAAATAACAGGAAATGTAGCTTCCGATACTTTTGATGTCACAAATTGCAATGAAATAATGAAATTTAATGCCACATTACCTGGAGATTCGTTGCTTCCTGGCAACAAGAATCCTGATTGGTTAACATTCAGTGGTGAAGGTCCTTTTGTAATTTTTGACGTCCCTAACGTGAATGGGCGTAAGTTAAAGTCAATGTTGTTGTGTATTGTCTATTCTTCTTCCTCAAACATTGTATCATCAGAAGAAGGCCCTATCATTAAAAACCTGTGTATCATAAATCACACAAAGACCACCCCTTTTCTCTATGATGGAGATACACTGTCTTCACTTAGTGATGAGGAATGGCAGAAAGTAATATCTAACTTTGAAGCTGGTGACAAAGTGCAGATTGTTGCTGCTTCTGGGTTAGGATTCACTGCGAAGAAGACGGCAGTTTATCTCATATATGCAGCAGAAAATATGAATGTTCATGATGGAGGAGAAAAGCATTTAGGTGAATTTGATGCAGCTTTTGAAACAAAATTGTAG 1242 0.372 MKRLRLLQFANVQLVGDFKYLSTDLRWLCWHEFPSEYTNANFDQGNLVAIDFKYSKLELVWKKSQMMKQLKILNLSHSQHLTQTPDFSNLPNLEKLILKYCPKLTSVSHTIEHLKQVLLINLKGCSGLRVLPKSIYRLKSLKTLILSGCSLIDKLEEGIEQMESLATLMADKTAITQVPHALLRLKSIVYISLCDFEGLSRNVFLQSFVPNRNSQGLSSIIRGLPQVQNVRLECGSQLQITGNVASDTFDVTNCNEIMKFNATLPGDSLLPGNKNPDWLTFSGEGPFVIFDVPNVNGRKLKSMLLCIVYSSSSNIVSSEEGPIIKNLCIINHTKTTPFLYDGDTLSSLSDEEWQKVISNFEAGDKVQIVAASGLGFTAKKTAVYLIYAAENMNVHDGGEKHLGEFDAAFETKL 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152915g00002 413 Gene3D Ribonuclease Inhibitor 3 271 IPR032675 -
Stsc152915g00002 413 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 260 IPR044974 GO:0006952
Stsc152915g00002 413 SUPERFAMILY L domain-like 2 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152915g00002 Stsc-Chr152915 5964 8422 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152915g00002 1 197 WRKY Transcription Factor Family AT4G12020 32.394 1.14e-15 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152915g00002 - - ahf:112727909 602.053