Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152902g00001 ATGGCAAACATGGCCCCCTCTACCTCGCGGGGTTCCAACTCCTCTTCGAATGGCCTCCTCACCGTTACCATCGCCGGAGGCCGCCATGACCACAAAGACCCCGCTTCGAACAAGGACGATGAAGACGACGAGCTAGCGGATCCCGATGATCCTTTTGACGTTACCCACACCAAGAACGCCCCGCTCCAGACGCTAAAGCGTTGGAGACAAGCTGCATTCGTTCTGAATGCTTCCAGGCGCTTTAGATATACTTTGGACTTGAAAAAGGAAGAGGATAAAGAGCAAAAGAAAAGCATGATTAGAGCCCATGCACAAGTCATAAGAGCAGCTTTGCTTTTCAGATTGGCTGGGGAACGTGAACTAGTGACAAATACAGCCGTGCCATCCCTGGCTGCCCCAACGCCTGACGGTGACTACGCAGTTGAACTCGAACAACTAGTTTCAATGTCTAAGGATCAGAATGCTGTTTCCTTGCAACACTATGGAGGGGCAAGTCTACTTCAATACAACCTGTTGTATGTTGTACACTACGTTAATTGA 540 0.4981 MANMAPSTSRGSNSSSNGLLTVTIAGGRHDHKDPASNKDDEDDELADPDDPFDVTHTKNAPLQTLKRWRQAAFVLNASRRFRYTLDLKKEEDKEQKKSMIRAHAQVIRAALLFRLAGERELVTNTAVPSLAAPTPDGDYAVELEQLVSMSKDQNAVSLQHYGGASLLQYNLLYVVHYVN 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152902g00001 179 Pfam Ca2+-ATPase N terminal autoinhibitory domain 49 91 IPR024750 GO:0005516
Stsc152902g00001 179 MobiDBLite consensus disorder prediction 1 58 - -
Stsc152902g00001 179 FunFam Calcium-transporting ATPase 60 116 - -
Stsc152902g00001 179 MobiDBLite consensus disorder prediction 1 22 - -
Stsc152902g00001 179 Gene3D - 62 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152902g00001 Stsc-Chr152902 5600 6997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152902g00001 12 163 Primary Pumps ATPases AT3G21180 57.051 1.87e-50 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152902g00001 K01537 - ahf:112703833 254.603