Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152868g00002 ATGGGTGCTGGGAATTCACCGTGTGCCTCATGCAAGCTTCTGAGACGCAGGTGCACCAAAGATTGCGCCTTTGCTCCTTATTTCCCTGCCGATGAACCCCACAAGTTTGCCATCGTCCACAAAGTTTTCGGCGCCAGCAACATCAGCAAAATGTTGCAGGAACTTCCGGTGGAGCAAAGAGCCGATGCAGTGAGCAGCCTAGTGTACGAGGCGAATGCGAGGGTCCGGGATCCGGTGTACGGGTGTGTAGGAGCCATATCGTACCTTCAAAACCAAGTGTCTGAGCTCCAAATGCAGCTAGCAGTTGCTCAAGCAGAGATACTCTGCATCCAGATGCAGCAGCAACAGCAAGAAGAGCCATCTGCAATGATGATGATGCAACCACAACTACTCCCAAATGAAAATGAACTCTCTTCTCATCATCTTCAGTACTTTGCTACTGCTTTTGGATCATCTTCTTCTTCTACCAATAATGTAATTCATGAATCCTTCAAGAGAGAAAGTAGTGTTTTTGGATATGACATGGTTTCTTGA 534 0.4757 MGAGNSPCASCKLLRRRCTKDCAFAPYFPADEPHKFAIVHKVFGASNISKMLQELPVEQRADAVSSLVYEANARVRDPVYGCVGAISYLQNQVSELQMQLAVAQAEILCIQMQQQQQEEPSAMMMMQPQLLPNENELSSHHLQYFATAFGSSSSSTNNVIHESFKRESSVFGYDMVS 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152868g00002 177 Coils Coil 86 106 - -
Stsc152868g00002 177 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 140 - -
Stsc152868g00002 177 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Stsc152868g00002 177 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152868g00002 Stsc-Chr152868 8007 8896 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152868g00002 2 141 AS2 family AT2G30130 76.429 1.05e-73 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc152868g00002 LOB 1e-42 No_clan