Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152845g00001 AAACGGTTTCACACCCGTCTTATCGCCTTAGAGGACAAGGGTTCAAAACCCAAATCCTACATTTTGGAGAAAATTTTCTTGTTGGAGAGGAAACCGGCCGTGTTCCGGTTCGGTCCGACTGACCGGTTTCTGGCTGGTTCATCGGTTCGAATCCGGTTTTCAGAGAAACGGTTTCTAGTGTTGATCCGGACCGTGAGCATGGCCGGTTTCCGGTTAAACCGGTTCGGCCGGCCGATCCGGTCCGATTTTCAGAACTATACTTCTCACTCCGTTGTGGTTACAAATATTTCAGATGCAGGTGGCAAAGCCAGCTTTAAAAATCTCTCAGCAAGTGCTTTCAAAAGCATCCCGACTCTCAAAAGCCAGGAGCAAAAGCTCCTTGGCTTTTCGAATTACCAATGCAAAGAGAGCATCCCCTCTCATCTCGTCTTCCCACTGTTGCCCACTGTCGTCCGACCAACTCATCTTCGTGCTGCTGCAGCCGCTGTCTCCCTGCAGCTCGTCTCCCCGTCGCGTAGCGTCTCAATGGCCAGCAATCGTCGCCTCTCTCTCTTGAGTCTCGACCTCACTCTCAGAATCCCACCCAAACCGCTGTCTCCCTGCAGCTCATCTCCCCGTCGCGTAGCGTCTCAATGGCCATCCACCGTCGCCTCTTCGAGTCTCAGCTTGGAGGTCCTTGCCTCACCGCCTTCGTCTGACTTGACTCTCTCTGCATGTCCGTCCGTTGAAGGTACCTTTAGTGAAAAGACAAAACATCTTGGGCTGAGGAATAGAATTGAAAAGAAAGCTGCTTACCTGCAAGAGCTGGAAGAGCAAGTAAGGAATGCTTACTCTCTAATGATTTACTTTGGAAATGAGTTATGGAGCTTGTCTGTCTTCAGAACCTCATACAACGGAATGAGCAATTATGTAGCTCAGGAAATGGTCCCAGTGGAGGTGTATCTTTGCCTTTTTATTCTAGTGCAGACACGTCCGCATGCAACTGTTGAGGTGGAAATATCAGAAGATATGCAGCTTGTTCTTTTTGATTTCAATAGGTACAAGGGCTTCAATTGCCTTGCCTTGTATATTCTTTCGGAGAGAATGATGAATGCTGACTGTGTTATCTTATGTGTATTCTTGATCATTGAAAGACCAGAGTTAGGACCTCCTTCGTCACCACCACTTCCTGGAATATTAAAGGCCAGAGTTAAGCTTGAGCACTAA 1206 0.4826 KRFHTRLIALEDKGSKPKSYILEKIFLLERKPAVFRFGPTDRFLAGSSVRIRFSEKRFLVLIRTVSMAGFRLNRFGRPIRSDFQNYTSHSVVVTNISDAGGKASFKNLSASAFKSIPTLKSQEQKLLGFSNYQCKESIPSHLVFPLLPTVVRPTHLRAAAAAVSLQLVSPSRSVSMASNRRLSLLSLDLTLRIPPKPLSPCSSSPRRVASQWPSTVASSSLSLEVLASPPSSDLTLSACPSVEGTFSEKTKHLGLRNRIEKKAAYLQELEEQVRNAYSLMIYFGNELWSLSVFRTSYNGMSNYVAQEMVPVEVYLCLFILVQTRPHATVEVEISEDMQLVLFDFNRYKGFNCLALYILSERMMNADCVILCVFLIIERPELGPPSSPPLPGILKARVKLEH 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152845g00001 401 Coils Coil 252 272 - -
Stsc152845g00001 401 SMART DP_2 247 399 IPR014889 -
Stsc152845g00001 401 Gene3D Transcription factor DP 241 354 IPR038168 -
Stsc152845g00001 401 Pfam Transcription factor DP 318 346 IPR014889 -
Stsc152845g00001 401 PANTHER TRANSCRIPTION FACTOR DP 239 346 IPR015648 GO:0005667|GO:0051726
Stsc152845g00001 401 SUPERFAMILY E2F-DP heterodimerization region 310 346 IPR037241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152845g00001 Stsc-Chr152845 57 3577 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152845g00001 259 345 E2F-DP Transcription Factor Family AT5G02470 44.565 2.38e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152845g00001 K04683 - gmx:100797603 98.2117