Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152818g00001 ATGGTAACAATCTTAGATACTCATATAGTGATTCCAAAAGAAGATACTCCTAAGGGTCTTCTACATTTATCAGACAACGACCAACTATGGCGATGGAGTCACACACCTTCAATCTACGTCTACAAACCAAAACAAAACAACAAGAAGCTCAACCTCAGTGTTCTTCTTGAGAGAATGAGAGATTCCCTTAGCGAGATTCTCATTCATTACTATCCCTTAACTGGAAGGTTGAATTGGACCAACGGTGGTCGTTTGGAACTTGATTGCAACGCAAAGGGAGCGTTGCTTCTAGAAGCCGAATCTTCGAAATCAATGGCGGAATACGATGACTTCTTACCCCACAATCCAAGCATCAATGAACTCATCCCAACCGTTGATTATTCTCGTCCCATAAACGAGCTTCCTTTGTTGTTAGCACAGGTGACAAAGTTGAAAGGAAATGATGATGACGGCAGCTACTTTGCGGTTGGAGTGGCTATGTCTCATCCTTTAGCAGATGGAATCTCAGCGATTCGCTTCATCAACGCATGGGCGAAGCTCACTCGAGGTGCCACGTTGGATCCAGCAAATGACCTTCCTTTTCTTGATCGAACCAACCTCAAACCATCTCATCCCTTGAACCCACCCCGGTTCGACCACGCAGAATTCAAGCCTCTGCCTCTCATCCTGGGAAGAACCAACAATCTAGAAGAGCAAAAGAAGAAAACAACCTTCGCGCTTCTGAAACTCAACTCAAAAGATGTCCAAAAATTGAAGAAGAATGCAAACACAAACACAACCGTATACGGAAGCGAAAACGGCAATGATCGTATTCATGACCAATCTGAGAGACCGTACAGTAGATTTGAAGTTATAGGCGCGCATATATGGAGATCTGCATCCAAAGCTCGGAGGCTTCAAGAAAGTCAACCAACTGTTGTCAAATTCAACGGCAATATTCGTAGTCGGTTGCAACCGCCACTTCCTCATAACTACTTCGGAAATGCTTTGGCTCCAACGGTTACAACAATTTGTTCCGTTAAAGAAATCACCACTCAACCGTTGAGTTTTGTGGCGCAAAAGATAAGAGAAGCGGTTAAGAAAGTTTCGGATCATGAGTATGTGAAATCACAAATAGATTATGTGGCAGGATTTGAGGGACGCTGGGATTTGATTAGAACACCGTATTTGGAGAAAGGTAAGTATAGAGCTGATGTTCCTTTCTTTGGGAACCCTAATATTATACTTGGAAGTTGGATGAGTATGCCTTTGTATGAGGCTGATTTTGGGTTTGGGAAGCCTTTTTATATTGGTCCAGGACGTGTGTGCCCTTATGATAGAGCGGTTATTGCTCTAGCTCCAAATGATGATGATGATAATGGTGGTGGTGATGTTGTCATTTTCATGCATTTTCAGGAGGAACACATGAAAGATTTCATCAACTTCTTTTGGGAAGATATACCATCAAAATGA 1452 0.427 MVTILDTHIVIPKEDTPKGLLHLSDNDQLWRWSHTPSIYVYKPKQNNKKLNLSVLLERMRDSLSEILIHYYPLTGRLNWTNGGRLELDCNAKGALLLEAESSKSMAEYDDFLPHNPSINELIPTVDYSRPINELPLLLAQVTKLKGNDDDGSYFAVGVAMSHPLADGISAIRFINAWAKLTRGATLDPANDLPFLDRTNLKPSHPLNPPRFDHAEFKPLPLILGRTNNLEEQKKKTTFALLKLNSKDVQKLKKNANTNTTVYGSENGNDRIHDQSERPYSRFEVIGAHIWRSASKARRLQESQPTVVKFNGNIRSRLQPPLPHNYFGNALAPTVTTICSVKEITTQPLSFVAQKIREAVKKVSDHEYVKSQIDYVAGFEGRWDLIRTPYLEKGKYRADVPFFGNPNIILGSWMSMPLYEADFGFGKPFYIGPGRVCPYDRAVIALAPNDDDDNGGGDVVIFMHFQEEHMKDFINFFWEDIPSK 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152818g00001 483 Gene3D - 1 218 IPR023213 -
Stsc152818g00001 483 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 469 - -
Stsc152818g00001 483 Gene3D - 225 478 IPR023213 -
Stsc152818g00001 483 Pfam Transferase family 1 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152818g00001 Stsc-Chr152818 4649 6817 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152818g00001 2 478 Monolignol Biosynthesis Gene Families AT5G48930 32.427 3.63e-75 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152818g00001 K13065 - gmx:100779814 481.485