Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152817g00002 TACGTCTCCAAGGTTGGGATGACATTTATGTCATGTATAGAAGCTAATGATTTCTACAAGGAGTATGCTAAACGAGCTGGATTTGCTTCTAAAATAAAAAATTCACAGAGAAACAAAGAGACCGATGCAATCAAGAATCAACTCTTCACATGCAACAGAGAGGGGAAAATGACATCTAACATACCTGAAGCGGAGAAGACGAATCTGATGTCCTCAGCTTTGTTTGAGGTTAATGTTGAGAATTCAAGACTGTTTGATTGA 261 0.3793 YVSKVGMTFMSCIEANDFYKEYAKRAGFASKIKNSQRNKETDAIKNQLFTCNREGKMTSNIPEAEKTNLMSSALFEVNVENSRLFD 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152817g00002 86 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 4 60 - -
Stsc152817g00002 86 Pfam FAR1 DNA-binding domain 17 63 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152817g00002 Stsc-Chr152817 10120 10382 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc152817g00002 FAR1 2.1e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152817g00002 - - aip:107645542 72.7886