Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152749g00003 ATGTTGAGAATACTTGTATCCCTTGTATTGATCTCAACACTTGTTCACACTTCATCTTCATCAAGTTACTCTACTACTTCCAATTCCACAAGAAAATCCATCAACACATACAAGAAATTCATAAAGAATGAGTGCAATTCAACCACATACCCTGATTTCTGTTACAAGTATTTGTCCCACTATGCGTCCCAAGTTAAAACAAACCGCGTCACACTCACAAAAGTGGCCGTCAACGTAACTGTACTGGTGGCTAAAAGCACGTTCAGAACGCTGACAAAGCTATCCAAACTGAAGAAGCTTACTCATGCTGAGACTTCGGTCTTAGCGGATTGCCGGGAAAACATGGATGACACGGTGGACCGGCTGCAGCAGTCGGCGGAGGATTTGGCGGGGCTGAACGGAACGAGCACGGCGGAGGAGAGGTTTGAGTGGGATAGCATAAAGACATGGATGAGTGCTGCAATTACGGATGAGTACACTTGTACGGATGGATCTGATGAATTGAAAGTTAGGGCTTCTTTGAAGAAGAAGATCCAAACAATCATTTCTAATGTTGTGTGGATGAATAGCAATGCTCTTGCTCTTGTTAACAAGCTTTCTTACTAG 606 0.4356 MLRILVSLVLISTLVHTSSSSSYSTTSNSTRKSINTYKKFIKNECNSTTYPDFCYKYLSHYASQVKTNRVTLTKVAVNVTVLVAKSTFRTLTKLSKLKKLTHAETSVLADCRENMDDTVDRLQQSAEDLAGLNGTSTAEERFEWDSIKTWMSAAITDEYTCTDGSDELKVRASLKKKIQTIISNVVWMNSNALALVNKLSY 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152749g00003 201 SMART PMEI_2 36 195 IPR006501 GO:0004857
Stsc152749g00003 201 Pfam Plant invertase/pectin methylesterase inhibitor 39 195 IPR006501 GO:0004857
Stsc152749g00003 201 CDD PMEI-like_3 45 200 - -
Stsc152749g00003 201 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 200 IPR035513 -
Stsc152749g00003 201 NCBIfam pectinesterase inhibitor domain 13 199 IPR006501 GO:0004857
Stsc152749g00003 201 FunFam Pectinesterase 37 200 - -
Stsc152749g00003 201 PANTHER PECTINESTERASE INHIBITOR-LIKE 5 195 - -
Stsc152749g00003 201 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 199 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152749g00003 Stsc-Chr152749 11645 12250 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152749g00003 41 200 Carbohydrate Esterase AT1G53830 32.530 2.47e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152749g00003 - - adu:107477628 277.715