Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152749g00002 ATGGATATGAAAAATGTTGTTGTTGTTGTCTCATTATTAGTTCTTCTCTCTATACCCAATTTTTCTTCCTCTTCTAATCCTTCAACTAATTACCAAAACACCCCTGAGAGTAGCAACAAACAACAAACTAATTATTACTACAAAAGCTACATAAAAAGCTCATGCAACACAACAACATACCCTTCGATATGTTACAAGAATCTCAACCGTTATGCTTTGTCCATTCAAGCAGATCCTCTCAAGCTATGCAACACTTCTCTCTCCCTCGCATTAAAGGCGGCTCGCTCCGCCGCCTCCACCGTCTCCAAGATCCTCAAGAAGGGGAACAACAACCTCACGGCGCAGGCCAAGGCGGTGGTGCATGATTGCTATAGCAACCTGAAAGATTCCGTTGGGGAGATGCAAGATTCCATTTATGAAATGGGAAATTTGTATGATGATAGTGACAAAGGCTTTCACTTGAGCAACATAAAGACATGGGTGAGTGCTGCTATCACCAATTATAACACATGTTCTGATGGATTTGAGGAGATGAACAACGTGGATGGTGATCTTAGAGATAAAATCAGAACCCTTGTTTCCAATTTGGACAGGATGACAAGTAATGCCTTGTATTTCATCAACCACCTCCCGTATTAA 639 0.4131 MDMKNVVVVVSLLVLLSIPNFSSSSNPSTNYQNTPESSNKQQTNYYYKSYIKSSCNTTTYPSICYKNLNRYALSIQADPLKLCNTSLSLALKAARSAASTVSKILKKGNNNLTAQAKAVVHDCYSNLKDSVGEMQDSIYEMGNLYDDSDKGFHLSNIKTWVSAAITNYNTCSDGFEEMNNVDGDLRDKIRTLVSNLDRMTSNALYFINHLPY 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152749g00002 212 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 204 - -
Stsc152749g00002 212 NCBIfam pectinesterase inhibitor domain 4 210 IPR006501 GO:0004857
Stsc152749g00002 212 Pfam Plant invertase/pectin methylesterase inhibitor 50 204 IPR006501 GO:0004857
Stsc152749g00002 212 Gene3D Invertase/pectin methylesterase inhibitor family protein 46 211 IPR035513 -
Stsc152749g00002 212 CDD PMEI-like_3 53 211 - -
Stsc152749g00002 212 SMART PMEI_2 46 206 IPR006501 GO:0004857
Stsc152749g00002 212 FunFam Pectinesterase 47 211 - -
Stsc152749g00002 212 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 210 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152749g00002 Stsc-Chr152749 8290 8941 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152749g00002 49 210 Carbohydrate Esterase AT3G14310 28.916 2.50e-15 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152749g00002 - - aip:107634201 275.404