Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152724g00002 ATGAGCCCCGTGTTGAATTGCCGGACATATTCATCGTCTTTCGGTGGCAAAGGAAGCAGGGATGATACTGGCACAGAAGTTTTTGCTGGTTCTAGTGCTGGTGATGATTCTGTTGTTGCTGGTGATTTAGCTGAGAAGATGAAAGATGCACGGAAGAGTGTGGTAGAGACAGCTAAACATGCCAGAGAAAAGGTCAAAGAAACCTCGGATGAGTTGACTCTGTATGCTCAACAGTTGCTTGATTCGCATCGGTATCTTAACAAGGTGGTTATTCCGGTTGGTAGTACATTAACTGCTACTCTAGTAGCTTGGTTTTTGATGCCTTGGATTTTGAGGAAATTTCACAAATATGCAATGAAAGGTCCAATTTCTCTTATACCTGGAAGCACATCATGGGAAGCATTTTCTTTTGAGAAAAGCTTTTGGGGTGCTATGGAAGACCCAGTGGATACTTAG 456 0.4298 MSPVLNCRTYSSSFGGKGSRDDTGTEVFAGSSAGDDSVVAGDLAEKMKDARKSVVETAKHAREKVKETSDELTLYAQQLLDSHRYLNKVVIPVGSTLTATLVAWFLMPWILRKFHKYAMKGPISLIPGSTSWEAFSFEKSFWGAMEDPVDT 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152724g00002 151 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 45 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152724g00002 Stsc-Chr152724 9776 10231 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152724g00002 5 148 Mechanosensitive Ion Channel Family AT4G00290 42.069 2.55e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152724g00002 K22047 - gmx:100814954 197.208