Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152697g00001 ATGGGAAGAGCAGATGATTTGGACATGAATTACTATCTGTTTAGCTGCCCTTTTGTTGAATTTGTTGTTAAGGACATTGTTAATAGGGCATTGGAGGATGATCCTATACTTGCTGCTGCTCTTCTTAGAATGCACTTCCATGATTGTTTCATTCAGGGATGTGATGGATCAATTTTGATTGACTCCACAAGGGGTAACACAACAGAAAAGGATTCACCAGCAAATTTGAGCTTGAGAGGCTATGAAATCATAGATGACATCAAAGAAGAGCTTGAAAGACAATATCCTGGAGTGGTTTCATGTGCTGATATTCTTGCTTTGGCTGCTAAAGATGCAGTTTTCTTTGCAGGGGACCATTTTATGACATACCAAAGGGAAGAAAAGATGGAATAA 393 0.3893 MGRADDLDMNYYLFSCPFVEFVVKDIVNRALEDDPILAAALLRMHFHDCFIQGCDGSILIDSTRGNTTEKDSPANLSLRGYEIIDDIKEELERQYPGVVSCADILALAAKDAVFFAGDHFMTYQREEKME 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152697g00001 130 PRINTS Plant peroxidase signature 16 35 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc152697g00001 130 PRINTS Plant peroxidase signature 40 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc152697g00001 130 PRINTS Plant peroxidase signature 79 92 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc152697g00001 130 PRINTS Plant peroxidase signature 98 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc152697g00001 130 Pfam Peroxidase 23 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc152697g00001 130 ProSitePatterns Peroxidases active site signature. 38 49 IPR019794 GO:0004601
Stsc152697g00001 130 PANTHER PEROXIDASE 25-RELATED 9 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc152697g00001 130 PRINTS Haem peroxidase superfamily signature 99 116 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc152697g00001 130 PRINTS Haem peroxidase superfamily signature 38 52 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc152697g00001 130 SUPERFAMILY Heme-dependent peroxidases 6 120 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc152697g00001 130 Gene3D - 6 129 - -
Stsc152697g00001 130 ProSiteProfiles Plant heme peroxidase family profile. 6 117 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152697g00001 Stsc-Chr152697 2399 3228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152697g00001 4 120 Peroxidase AT4G33420 68.376 9.83e-55 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152697g00001 K00430 - gmx:100809245 194.126