Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152675g00001 ATGGAGCGCATAAAAATAAAGGAGATAAGGAGTCAAGCAAAAGTGGTTGGAACTCTAGTGACATTTGGAGGGGCAATGCTGATGACACTTTACAAAGGTCCTGCATTCAACTTGTTTCATTCATCAAACACGATCCATCAGAATTCTCAGACCCACTCTCTTGATAATCACAAAAACTGGATCACCGGCACACTTTTCATTTTTCTTGGTTGTGTCGCTTGGTCTTGTTTCTACATTTTGCAGTCGATAACGGTGGGAAGATATCCAGCAGAACTATCACTGTCATCTTTGATATGCTTAGCGGGTACTTTTGAAAGTGCAGTGGTTGCTCTCATTTCAGATCGTCGCCCTCAAGCATGGGCAATTGGCTTCAACTACTCCCTCTACGGTCCTCTCTACACCGGAATAGTGAGTTCAGGAATAGCATATTATATACAAGCGTTAGTAATGCAAAGCAGAGGACCAGTGTTTGTTACATCTTTTAATCCACTTTGCATGATCATTGTTGCTGCTTTGGGTTCCTTACTACTAGGAGAACAGCTCCACTTTGGAAGTATCATTGGAGGTATTATCATCGCAATAGGGCTCTACTCTGTGGTGTGGGGTAAAGGAAAAGACCACACAGACCACACAGCATCATCACCAACAATAAAAGAAACTGAAACTCAGCAGCTTCCAATTACTTCACCAGCCCAAAAATAA 702 0.4231 MERIKIKEIRSQAKVVGTLVTFGGAMLMTLYKGPAFNLFHSSNTIHQNSQTHSLDNHKNWITGTLFIFLGCVAWSCFYILQSITVGRYPAELSLSSLICLAGTFESAVVALISDRRPQAWAIGFNYSLYGPLYTGIVSSGIAYYIQALVMQSRGPVFVTSFNPLCMIIVAALGSLLLGEQLHFGSIIGGIIIAIGLYSVVWGKGKDHTDHTASSPTIKETETQQLPITSPAQK 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152675g00001 233 MobiDBLite consensus disorder prediction 215 233 - -
Stsc152675g00001 233 PANTHER WAT1-RELATED PROTEIN 1 211 IPR030184 GO:0016020|GO:0022857
Stsc152675g00001 233 Pfam EamA-like transporter family 62 200 IPR000620 GO:0016020
Stsc152675g00001 233 MobiDBLite consensus disorder prediction 209 233 - -
Stsc152675g00001 233 SUPERFAMILY Multidrug resistance efflux transporter EmrE 124 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152675g00001 Stsc-Chr152675 117 2485 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152675g00001 1 233 Nodulin-like Gene Family AT4G08300 48.085 2.49e-72 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152675g00001 - - gmx:100777641 367.081