Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152660g00001 ATGGCTGGTTTCCTGTTAACTCCACCTCTCCTGAGGAGAAATCCATCCATCTTTAATTTATTTTATCCTAAAAATGGCGTAATCAATGTTGAAGTTCTATCAAACTTTGGCTTGATCTACTACGCTTTTCTCAATGGCTTAGAGATGAACTTGGACACCATTCTCAAGGCCAAAAAGGAATCTATAAGCATTGCAGTTGCTGGAATAATCTTTCCCTTTATAACAGGATCGGGATTATATGCATTATACCGAAAATTTTATATTACGGGCAACATTTTTCGCCTTGAAGAAATCTCAACTCATGCTTATTTAATGTGGAGTTTAATTCTCACAGTCACAGGTTTTCCAAACCTAGTTGAAATCCTCTCAGAGCTCAAACTTCATTACACTGGCTTAGGCAAAGTTGCTTTAACAGCAGCCATGATCAGTGACACTTACAATTGGATTCTTTTCACATTGCTAATTCCATTTTCTTCACTTGATATTTCAAATGCGATTTATTCAGTAATAAGCACAATCTTATTCATTGTTGTGTGCATCTTTCTGGTTCGTCCTATAATCACAAAGTTTGTTGAACAGAAAACAGAGAAGAATGAACTGGATGAGTACGTACTCCTCTTTGTGGTGATGGGGCTTTTGTTGTGTTCACATGTATCAGACATTCTGGGAACACATGCCATTGTTGGTGCTTTTGTGTATGGACTAATTTTGCCTCATGGGAAGTTTGCTGACTTTGTTATGTCTGTTTCTGATGATTTTGGTGGGGGGTTTCTAGCATCAGTTTACTTTTCTGGAAATGGGATGAGGTTTATGATTGAATCTCTTTTTACTCATACAAATTGGGTAGTGTCATTGCTTGTTGTGTTCTTGTCATGTGTCACAAAGATATTAGCTACTTTATTTGCCACCTCCTTATTTGGTAGGCCTGCTAAAGATGGTTTTGCCATTGGATTGCTTCTCAACACTAAGGGTGCCTTGGCTCTTGTATTGCTAAGCATTGCTTGGGATAAAGTGGTACTTTTCTATTCTTGA 1032 0.3769 MAGFLLTPPLLRRNPSIFNLFYPKNGVINVEVLSNFGLIYYAFLNGLEMNLDTILKAKKESISIAVAGIIFPFITGSGLYALYRKFYITGNIFRLEEISTHAYLMWSLILTVTGFPNLVEILSELKLHYTGLGKVALTAAMISDTYNWILFTLLIPFSSLDISNAIYSVISTILFIVVCIFLVRPIITKFVEQKTEKNELDEYVLLFVVMGLLLCSHVSDILGTHAIVGAFVYGLILPHGKFADFVMSVSDDFGGGFLASVYFSGNGMRFMIESLFTHTNWVVSLLVVFLSCVTKILATLFATSLFGRPAKDGFAIGLLLNTKGALALVLLSIAWDKVVLFYS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152660g00001 343 Pfam Sodium/hydrogen exchanger family 15 335 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc152660g00001 343 PANTHER CATION/H + ANTIPORTER 2 335 - -
Stsc152660g00001 343 Gene3D - 1 341 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152660g00001 Stsc-Chr152660 1871 3599 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152660g00001 1 340 Antiporter Super Family AT2G13620 30.814 2.64e-58 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152660g00001 - - gmx:100804266 444.506