Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152630g00001 ATGTTCCTGTTACATGCAATTCCTTTTGCACTCCATCTTCAAACAGGTTTTCCTCTCCCATTTTCATCAACAAGCCGTTCTGCTGTAGCCTCTCACCGCGCCCACTGCAGCAGCAGCAAAAGGGTTTGGGAGTTGTTCGTGATATCAGATCACCTCTTTGGCGAAAAGCTGAACAAGATGTCCAAGAGGTTGATGGATGTTGCAAAGGCAGAAGGGATTCAAGTTAATGAGATTGCTCTGGAAGAACAAGCAGAAAGAGTTGATGGAGATATGCATGAAAATAGACATACGTTCTTCTACACACAACTTTGTGCTTTTCCTGCATTTGGCACCTATGACATAGCACAAATGGATAGAGTTGATAGTGCGAACAAGCATGGAATTCTTCTTGAAGTTGTACAAATCCTCACTGATATGAACCTCATTATAACCAAAGCTTACATTTCTTCTGATGGTGAATGGTTCATGGATGGACATCAAGCAGCTCAACTAGCTAACATGGAGTTCCTTCATAAGGAAAGGCAACATATTATTGAACTGCTCGCTAAGATCCCTATTTCAGGAGTCATTGATCAAGCATTATGA 585 0.4171 MFLLHAIPFALHLQTGFPLPFSSTSRSAVASHRAHCSSSKRVWELFVISDHLFGEKLNKMSKRLMDVAKAEGIQVNEIALEEQAERVDGDMHENRHTFFYTQLCAFPAFGTYDIAQMDRVDSANKHGILLEVVQILTDMNLIITKAYISSDGEWFMDGHQAAQLANMEFLHKERQHIIELLAKIPISGVIDQAL 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152630g00001 194 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 117 158 IPR040217 -
Stsc152630g00001 194 Gene3D - 58 106 - -
Stsc152630g00001 194 SUPERFAMILY ACT-like 120 160 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152630g00001 Stsc-Chr152630 665 6571 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152630g00001 59 91 Core DNA Replication Machinery Family AT5G22010 69.697 1.94e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152630g00001 - - aip:107643722 78.9517