Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152619g00002 ATGATGAGTAGTATTGTAATCTGCGGTAGTGAAGGTAATATTAGTTTATCAGAGAAGAGGGAGAGGGTTTTGAATAAGCTTGTGGAGGGGCATAAACATGCCACTGAGCTTAAGCATCTCCTTCTGAATCAGAATCAGAATCTGAATCCTACTAGCTCATCATCAGCTGAAGCAGTATTAATAAGCAAGATTCTCAGATCTTTCACGGAGACTCTCTCTGATCTAGAAGATTCTTCTGCTCCTGCTTCTGCTTCAGCTTTAGCTTCCTCCCTTAACAATTGGTCTCACCAGCTAGTTGTTGCTGCAAACTCTTACTCCACCAATAACGATCTCAAGTCTGAAGGTTCGAGTGAGAGTAGCAAAAGATCCTCCTCATCAGTCCCTAATAAGGATCGCAGAGGCACATATAAAAGGAGGAAAACGGAAGAGACATGGAGCAATGTATCTCCCAACACTGAGGATGATTGTGCCTGGAGAAAGTACGGACAGAAGGAAATCCTCAATTCTAAATTCCCCAGGAGTTATTATAGGTGCACTCGAAAGTTTGATCAAGGTTGCAAAGCAACAAAACAAGTTCAAAGGATTCAAGATAATCCAGTTTTATATCAAATTACCTACATTGGTCAACACACATGCAAAGAATCTCTCAAAGCTTCACAAATGACGATGATGACAACTACAAATCTTTTGAATCCAAAAGATCATCATCAAACCCCACCAGCAAATGCTATAATCAAACAAGAGGACACAACTCCAAGCGATGATCTAATCATTGCAGAAAAATTGGATGGAAACCTTTGGTCTGATTTGAAGGATTTCGAGATAACCAACCCTCCTACTTCTGCTAATAATAACTTTGGGGTGTTTTCTTCTTATAATTACTGCACCACCGGATTCCAGTTTGATGATGATCATCATGATATATGA 927 0.3991 MMSSIVICGSEGNISLSEKRERVLNKLVEGHKHATELKHLLLNQNQNLNPTSSSSAEAVLISKILRSFTETLSDLEDSSAPASASALASSLNNWSHQLVVAANSYSTNNDLKSEGSSESSKRSSSSVPNKDRRGTYKRRKTEETWSNVSPNTEDDCAWRKYGQKEILNSKFPRSYYRCTRKFDQGCKATKQVQRIQDNPVLYQITYIGQHTCKESLKASQMTMMTTTNLLNPKDHHQTPPANAIIKQEDTTPSDDLIIAEKLDGNLWSDLKDFEITNPPTSANNNFGVFSSYNYCTTGFQFDDDHHDI 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152619g00002 308 SMART WRKY_cls 152 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc152619g00002 308 MobiDBLite consensus disorder prediction 125 144 - -
Stsc152619g00002 308 Pfam WRKY DNA -binding domain 153 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc152619g00002 308 Gene3D WRKY domain 138 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc152619g00002 308 ProSiteProfiles WRKY domain profile. 153 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc152619g00002 308 MobiDBLite consensus disorder prediction 107 151 - -
Stsc152619g00002 308 MobiDBLite consensus disorder prediction 107 124 - -
Stsc152619g00002 308 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 27 235 IPR044810 GO:0003700
Stsc152619g00002 308 SUPERFAMILY WRKY DNA-binding domain 151 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152619g00002 Stsc-Chr152619 4308 6059 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152619g00002 19 249 WRKY Transcription Factor Family AT3G56400 40.517 1.01e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc152619g00002 WRKY 2.9e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152619g00002 - - adu:107470163 400.593