Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152605g00001 ATGGTTCCTTCCATAGCAGACGAAATGGTAGCACTCGCCAGGGCCGACGGCTACAAGGCTCCAGAGCTTCAAAAAATGAAGAAATGCAATTCCAGGACAGATGTTTATGCATTTGGGATACTGCTGCTGGAGATTTTGATTGGGAAGAAGCCAGGGAAACATGGAAGAAACGGAGAGTTTGTTGACTTGCCGGCGATGGTGAAGGTGGCGGTTTTGGAGGAGACTACAATGGAAGTGTTTGATGTGGAGCTCTTGAAAGGGATAAGAAGTCCAATGGAAGATGGCATGGTGCAGGCATTGAAGCTGGCGATGGGATGCTGCGCGCCGGTGGCGGCTGTTCGGCCAAGCATGGATGAAGTTGTGAGGCAGTTGGAGGAGAACAGACCAAGGAACAGATCTGCATTATACAGCCCTACAGAAACAAGGAGTGGAAGTGTTACCCCATTTTGA 450 0.4978 MVPSIADEMVALARADGYKAPELQKMKKCNSRTDVYAFGILLLEILIGKKPGKHGRNGEFVDLPAMVKVAVLEETTMEVFDVELLKGIRSPMEDGMVQALKLAMGCCAPVAAVRPSMDEVVRQLEENRPRNRSALYSPTETRSGSVTPF 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152605g00001 149 MobiDBLite consensus disorder prediction 130 149 - -
Stsc152605g00001 149 SUPERFAMILY Protein kinase-like (PK-like) 16 125 IPR011009 -
Stsc152605g00001 149 Pfam Protein tyrosine and serine/threonine kinase 18 124 IPR001245 GO:0004672|GO:0006468
Stsc152605g00001 149 Gene3D Transferase(Phosphotransferase) domain 1 5 142 - -
Stsc152605g00001 149 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 6 127 - -
Stsc152605g00001 149 MobiDBLite consensus disorder prediction 129 149 - -
Stsc152605g00001 149 ProSiteProfiles Protein kinase domain profile. 1 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152605g00001 Stsc-Chr152605 6239 6688 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152605g00001 1 149 Receptor kinase-like Gene Family AT3G24660 80.000 1.62e-82 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Stsc152605g00001 PK_Tyr_Ser-Thr 1.3e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152605g00001 - - gmx:100814814 280.026