Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152602g00002 CTCGCTTACTCGACGGTAGTGACTGAGAAATCGGATGTGTTTAGCTATGGTGTTTTGGCCTTAGAAATAATTTCAGGAAAGCACCCTGCTGATCTTATTCTTCACATACAAGCTTCTAGTGATTCAAATATAATAAAGTTGAATGAGATTTTAGACCCACGCCTCTCACATCCAACAAATGAGCATATTCTGAAAGACTTGGCCTTAATTGTAAATATAAGTGTTTCATGTTTGCAGACAAGCCCTCAAATTCGACCAACTATGCGAAATATAGTCCGGCTGCTTGAAATGGAAGCTGCAGATAAATATTGA 312 0.3846 LAYSTVVTEKSDVFSYGVLALEIISGKHPADLILHIQASSDSNIIKLNEILDPRLSHPTNEHILKDLALIVNISVSCLQTSPQIRPTMRNIVRLLEMEAADKY 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152602g00002 103 Gene3D Transferase(Phosphotransferase) domain 1 1 102 - -
Stsc152602g00002 103 PANTHER LEUCINE RICH REPEAT KINASE 2 1 98 - -
Stsc152602g00002 103 SUPERFAMILY Protein kinase-like (PK-like) 4 96 IPR011009 -
Stsc152602g00002 103 Coils Coil 100 103 - -
Stsc152602g00002 103 Pfam Protein tyrosine and serine/threonine kinase 6 95 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152602g00002 Stsc-Chr152602 12315 12628 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152602g00002 2 95 Receptor kinase-like Gene Family AT5G65700 34.314 1.03e-12 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Stsc152602g00002 PK_Tyr_Ser-Thr 1.3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152602g00002 - - ahf:112786571 151.369