Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152550g00003 ATGGCCCAAGAAGTGTTGAAAACTCATGACATTGAGTTTTGTGGAAGGCCTTCTTTTCTTGCCCAAAAGAAAATTACCTACAATAGGGTTGAAATTGCATTTTCACCATGCAATGATTCATGGAAAGCAATCAAGAAAATTTGTATGACCCATTTTCTTAGTTCAAGTAATGTCTCAAGATTCTCCTCCATACGCCAATTTGAGGTGAATCAAATGATCAAGGAGATTTCAATGCAAGCTTCTTCTAAAAGTGTGACAAATTTGGATGATTCAATTTTGTCACTCACCAATGCTATAATTTCTAGAATTGCTTTTGGAAGAAGCTATAAGGATGATAAAGGAGTTATTGTTACTAAGAGGTTGCTTGGTTTGCTTAATGAATCTCAAGGTTTGTTGGGAGCATTATTTGTTTCTGATTATGTTCCATTCATGGGGTGGATTGATAAACTTAGAGGTATGCATTCTCTTCTTGAAAGAAATTACAAGAAGTTGGATGCATTCTTGCAAGAAATTGTCAACCAACACCTTGATCATCCCAGGAGACAAAAATCAGATGATGATGAAGATAATGTCATTGATGTCTTGTTGAAGCTGAAGAATAATAAGGAGCAGTCATTTCCATTTGATCTCACTTATGAACACATCAAGGCTGTGCTAGTGGACATACTTATTGGAGGGACATATTCAAGTGCTACCACATCAACTTGGGCCATGGCCAAACTATTGAAGAACCCTAAAATAATGATGAAAGTTCAAGCAGAACTTAGAAACTTCTTTGGTAGAAAAGGCTTTGTTGATGAATATGAAATAACAAAAAATAATAATGATCTACCTTATCTTAAGGCAGTGATAAAAGAGACACTTAGATTAGAGCCACCATTACCACTACTTTTAACAAGAGAAACAAATGGAGCATGCAAATTAGGAGCATATGAAATTGAAGCCAATACATTAGTGTATGTTAATGCATGGGCGATTCAAAGGGACTCTGAAATTTGGAAAAATCCAGAAGAATTTTATCCCGAGAGATTTTTCGAAAGTTCAATTGATTTTAAGGGTCAAGATTTTGAGCTGATTCCATTTGGTTCTGGAAGGAGAATTTGCCCTGGATTGAATATGGGAGTTGCAACTGTGGAGATTATAGTTGCTAATCTTCTTTTTTGGTTTGATTGGGAGATACCAACAATTGGGATCGAAGATTTGGATAATAATGAAATCAAACTGGGAATTGTTCATAGCAAAAAGCATCCTCTT 1254 0.3549 MAQEVLKTHDIEFCGRPSFLAQKKITYNRVEIAFSPCNDSWKAIKKICMTHFLSSSNVSRFSSIRQFEVNQMIKEISMQASSKSVTNLDDSILSLTNAIISRIAFGRSYKDDKGVIVTKRLLGLLNESQGLLGALFVSDYVPFMGWIDKLRGMHSLLERNYKKLDAFLQEIVNQHLDHPRRQKSDDDEDNVIDVLLKLKNNKEQSFPFDLTYEHIKAVLVDILIGGTYSSATTSTWAMAKLLKNPKIMMKVQAELRNFFGRKGFVDEYEITKNNNDLPYLKAVIKETLRLEPPLPLLLTRETNGACKLGAYEIEANTLVYVNAWAIQRDSEIWKNPEEFYPERFFESSIDFKGQDFELIPFGSGRRICPGLNMGVATVEIIVANLLFWFDWEIPTIGIEDLDNNEIKLGIVHSKKHPL 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152550g00003 418 CDD CYP71-like 1 418 - -
Stsc152550g00003 418 PRINTS P450 superfamily signature 225 242 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152550g00003 418 PRINTS P450 superfamily signature 359 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152550g00003 418 PRINTS P450 superfamily signature 282 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152550g00003 418 PANTHER CYTOCHROME P450 71B11-RELATED 1 418 - -
Stsc152550g00003 418 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 361 370 IPR017972 GO:0005506|GO:0016705
Stsc152550g00003 418 Pfam Cytochrome P450 1 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152550g00003 418 Gene3D Cytochrome P450 1 417 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152550g00003 418 FunFam Predicted protein 223 418 - -
Stsc152550g00003 418 PRINTS E-class P450 group I signature 358 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152550g00003 418 PRINTS E-class P450 group I signature 368 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152550g00003 418 PRINTS E-class P450 group I signature 234 260 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152550g00003 418 PRINTS E-class P450 group I signature 95 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152550g00003 418 PRINTS E-class P450 group I signature 322 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152550g00003 418 PRINTS E-class P450 group I signature 1 17 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152550g00003 418 PRINTS E-class P450 group I signature 281 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152550g00003 418 PRINTS E-class P450 group I signature 214 231 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152550g00003 418 SUPERFAMILY Cytochrome P450 2 395 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152550g00003 Stsc-Chr152550 10839 14341 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152550g00003 1 416 Cytochrome P450 AT4G31500 41.905 3.34e-116 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152550g00003 - - gmx:100801312 449.899