Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152550g00002 ATGACTCTATCAAGCACTCTTATATGTAGGATTGCATTTGGGAGAAGGTATAAAGATGATGAAGGAGTTGAAAGGAGAAAGTTTCATAGTTTGTTCAATGAGATACAAGCTATGGTGGTTACTCCCTTTGTTTCGGATTACATTCCATTCATGGGTTGGATTGATAGAGTTAAGGGGCTTCATGCACGTCTTAATAGAATTTTCAAGGAGTTGGATGAGTTCTTGCAAGAAGTTATTGATGAACACATGAACCCTAATAGAGACACCAATGAAGAGGGAGAAGATATTGTTCATGTGTTGCTTCAATTGAAGAAACAACGTTCGTTATCCTTTGACCTCACTTATGATCACATCAAAGCAATATTAGTGTTTGCAACAGCTGATACAACCGCAGCCACAATAGTTTGGGCTATGACTGCACTTATGAAGAATCCAAGAGTGATGAAAAAAGTTCAAGAAGAAGTTAGAAACCTTGGAGATCAAAAAAATTTCTTAGATGAAGATGATATCAAAAGATGTAATTATTTTAAGGCTCTGATGAAAGAAATATTAAGATTATACTTACCAGCACCATTACTTGTGCCGAAAGAAACAAATGAAAAATGCTCTATAGATGGTTATGAAATTCCAGCTAAGACTATAGTTTATATAAATGCATGGGCTATTCATAGAGACGATAAAGCTTGGGAAAGTCCAGACGAGTTTTATCCAGAAAGATTTTTGGAAAGTTCAATTGATTTTAAGGGTCAAGATTTTGGGTTTATTCCATTTGGAGCAGGTCGTAGAATTTGTCCAGGTATGCATATGGCACTTGTAGCACTTGATCTTCTGCTTGCTAATCTTCTTTATTCATTTGATTGGGAACTTCCGAAAGGAGTTAAAATGGAAGATGTTGATTTTGAAGGTTTGCCAGGATTAGCTCAACATAAGAAGAATCCTCTTTATCTTGTTGCCAAAACAAAGGAGTAA 969 0.3571 MTLSSTLICRIAFGRRYKDDEGVERRKFHSLFNEIQAMVVTPFVSDYIPFMGWIDRVKGLHARLNRIFKELDEFLQEVIDEHMNPNRDTNEEGEDIVHVLLQLKKQRSLSFDLTYDHIKAILVFATADTTAATIVWAMTALMKNPRVMKKVQEEVRNLGDQKNFLDEDDIKRCNYFKALMKEILRLYLPAPLLVPKETNEKCSIDGYEIPAKTIVYINAWAIHRDDKAWESPDEFYPERFLESSIDFKGQDFGFIPFGAGRRICPGMHMALVALDLLLANLLYSFDWELPKGVKMEDVDFEGLPGLAQHKKNPLYLVAKTKE 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152550g00002 322 SUPERFAMILY Cytochrome P450 3 319 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152550g00002 322 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152550g00002 322 PRINTS E-class P450 group I signature 264 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152550g00002 322 PRINTS E-class P450 group I signature 3 21 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152550g00002 322 PRINTS E-class P450 group I signature 254 264 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152550g00002 322 PRINTS E-class P450 group I signature 134 160 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152550g00002 322 PRINTS E-class P450 group I signature 218 242 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152550g00002 322 FunFam Predicted protein 123 316 - -
Stsc152550g00002 322 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 257 266 IPR017972 GO:0005506|GO:0016705
Stsc152550g00002 322 Gene3D Cytochrome P450 1 322 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152550g00002 322 PANTHER CYTOCHROME P450 71B11-RELATED 2 319 - -
Stsc152550g00002 322 Coils Coil 148 168 - -
Stsc152550g00002 322 PRINTS P450 superfamily signature 264 275 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152550g00002 322 PRINTS P450 superfamily signature 125 142 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152550g00002 322 PRINTS P450 superfamily signature 178 189 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152550g00002 322 PRINTS P450 superfamily signature 255 264 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152550g00002 322 Pfam Cytochrome P450 6 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152550g00002 Stsc-Chr152550 6923 8563 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152550g00002 1 321 Cytochrome P450 AT4G31500 45.872 1.69e-101 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152550g00002 - - gmx:100801312 465.307