Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152530g00002 ATGAGTGGCCATAGCTCCCCATTGTCCATTCTAAGGCCAGAGGTCCAACAAGCTCTTCATGCAAAACCCACAGATTGGACTCATTGCAGCTTGTTTCAATGGAACGACAGGCCAGTTACAGTCCTGCCCCTCATCAAGAAGCTCATCGACAATAATATTAATGTGTGGATATACAGTGGTGATGTAGATTCAAAAGTATCAGTTACAGCCACCAGATATGCAATCAACGTCCTCAAGCTCCCAATCGTGACCCCTTGGTATCCATGGTATTCTGAAAATGAGATTGGAGGATATGCGGTGGAATACAAAGGATTGGTATTTGCCACAGTGAGAGGAGCAGGGCATTTGGTTCCAAGCTGGCAGCCAGAAAGAGCTTTCAACTTGATCTTTGCATTACTCAGTGGATATCCCCCATTTGGTTCACCAAAATGA 432 0.4514 MSGHSSPLSILRPEVQQALHAKPTDWTHCSLFQWNDRPVTVLPLIKKLIDNNINVWIYSGDVDSKVSVTATRYAINVLKLPIVTPWYPWYSENEIGGYAVEYKGLVFATVRGAGHLVPSWQPERAFNLIFALLSGYPPFGSPK 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152530g00002 143 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 12 122 IPR001563 GO:0004185|GO:0006508
Stsc152530g00002 143 Pfam Serine carboxypeptidase 12 134 IPR001563 GO:0004185|GO:0006508
Stsc152530g00002 143 SUPERFAMILY alpha/beta-Hydrolases 11 138 IPR029058 -
Stsc152530g00002 143 ProSitePatterns Serine carboxypeptidases, histidine active site. 105 122 IPR033124 GO:0004185
Stsc152530g00002 143 Gene3D - 41 135 - -
Stsc152530g00002 143 Gene3D - 12 31 - -
Stsc152530g00002 143 FunFam Carboxypeptidase 41 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152530g00002 Stsc-Chr152530 3766 6516 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152530g00002 14 137 Calmodulin-binding Proteins AT2G22960 31.818 5.48e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152530g00002 K16297 - gmx:100779407 195.667