Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152488g00003 ATGTATAACATGGTTTTGGTTTCATCATCATCTCCTTCTGTTGTATTTAGGGTTAAAAGGTGCCAACCAGAACTAGTGGCTCCGGCCACGCCCACTCCCCAAGAAATTAAACTGCTATCAGACATAGATGATCAAGAAGCGCTACGTTTTCTTGTTCCTAACATATACATATATCGTCACAATCCGTCAATGGAAGGAAAAGACCCTGTAAAGGTGATCAGAGATGCACTCTCAAGAACACTTGTCTTTTACTACCCATTTGCCGGCAGGCTTAGGGAGGGTCATGGCCGCAAGTTGATGGTGGATTGCACTGCAGAGGGTGTTTTGTTCGTTGAGGCTGACGCTGACGTCACACTTGATCAACTTGGTGAAGCTCTTGAAACTCCATTCCCTTTCTCCGAGGAATTGCTTTACAATGTTCCTGGCTCGGATAGAATTGTCGGCTGTCCCCTCTTGCTCATTCAGGT 467 0.4582 MYNMVLVSSSSPSVVFRVKRCQPELVAPATPTPQEIKLLSDIDDQEALRFLVPNIYIYRHNPSMEGKDPVKVIRDALSRTLVFYYPFAGRLREGHGRKLMVDCTAEGVLFVEADADVTLDQLGEALETPFPFSEELLYNVPGSDRIVGCPLLLIQV 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152488g00003 156 Pfam Transferase family 18 156 - -
Stsc152488g00003 156 Gene3D - 16 156 IPR023213 -
Stsc152488g00003 156 PANTHER ACYL TRANSFERASE 4 16 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152488g00003 Stsc-Chr152488 14419 14962 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152488g00003 25 156 Monolignol Biosynthesis Gene Families AT5G48930 37.121 9.95e-16 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152488g00003 K19861 - cave:132187918 221.476