Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152411g00001 ATGGTGGAGATGCAAAGGGAGACCATGAGCATGATGGTGGAGATGCAAAGGGATACCATGAGGATGACCGAGAAGCTAAGTGATTGGGCTTTACACGACAATTGCCAGTTACTTCAATTGCAATATCTGGTTGAACAGCAATCTCGTGAGATGGAGGAAATAAGAGCTCATCAGCAAGAAGAGCTTACTGAGCAGCAACAGAAGATAGTTCGTCAGATGCACCTCATTACTGCTATGGCTGAGCAGGTGAATCAGTTGATGCATCTCACGGATGGACGATTTGAAGAAATACGGGGCTTGTTGCATTCATTGCAGCAGCAACAACTCATTACACGTGGGGCAGCTGAAGAGCATGAGTCAGAGGAGCACCAGATAAACCTCTCACCAGCAGGTCAGAGACCGGTCTTCCCGACCGTTCCATCCACATTTACCCTAAGTCTTCAATTGTTCTGGGACATGATCGGTTCGGGAATGATGTCAATGCCTTCAGTATTCAGGATGCTCGGCCTGTTTCCAGCAATTATGTTCATCATAGTTATTGGAGCCCTAGCCTGTGCCTCAGTAGATATACTGTTGCGGCATTGTAGAGCGGCACATGTTGACAAGTATGAAGACCTGGTGCATCGTAGCTTTGGAGGCTTCGCAAGGAAGATGTTCCAGTTTTTTATTGTCCTCAATAATTTTGCTGCTATTATACTCTTTTTGAATACTATAGGTGATATTTTATGTGGATCACGACCTCATAGTTTGGGGATCTTGGAAGTGTGGTTTCGCTATAATAACCGACTCATGATCCTTTTTGTCACCGGCGTGGTTATTGTTGTTCTTCGCCTATCGCTTCACCGAAGAAAGTTAGGTTGTTGTATTATAGCTGTCATACTGGCAGCTTTATATGTGGTCCTCCTTGCATGGAGTGTCTCGGTGACATTGGTAGTTTCTCATTTACCCAGTCCCAGACTTCTTCCGGACATTGCTAACACTGCATCTGCGTGGGACTTCGTTACATCTATTCCTACTATAGCGGCTTCATTTGTCAACCATTACAATGTACACACTATAGATCAGGAGTTGGGCTCTTCTAGCTCTATCCGATCTTTCAGCTGTTCCTGTGTGTTGAGCATCTTATTGTACTTGTTCGGTGGTATTACTGGTGTGTTGTTATTCGGCGATTCTACCTCTGATAATGTTCTCCTCAATTTCGGAGCCATTATCAATAGGCAGAATAATATACGGATCATCTCTATCGGTATGAGTGTTATGTTGGTTTACGCACTACACCTTTTGTTGGTGTTGCCATTTATGCTGGGGTCATTGCGTTCTGATTTTGAGCGGCTCATTCCGAGTCGTATTATTCCGGAGAATTTCCAGACTATTTGGTTGGGGGCGGTTCCTCTTGCCCTGCATGGATTGGCGCTTTTGCTGACACAATACCCACATTTTATGAACTTTTTGTGTCAGCTGAATGGAGCACTAGTAGCAGGTTCCCTTGGATTCATTCTCCCGGCTGTCATTGCTTTGCGGGATCCTGGTGGTATCGCAATATTCACGGAGAAAATTTTGTCATCCGTCTTTGGTTTTGCTATGGGGATCTTGTTTATCATTGCGACTTATAGATATTTTGTTAACTACTTTTCACACCGGTAG 1644 0.4446 MVEMQRETMSMMVEMQRDTMRMTEKLSDWALHDNCQLLQLQYLVEQQSREMEEIRAHQQEELTEQQQKIVRQMHLITAMAEQVNQLMHLTDGRFEEIRGLLHSLQQQQLITRGAAEEHESEEHQINLSPAGQRPVFPTVPSTFTLSLQLFWDMIGSGMMSMPSVFRMLGLFPAIMFIIVIGALACASVDILLRHCRAAHVDKYEDLVHRSFGGFARKMFQFFIVLNNFAAIILFLNTIGDILCGSRPHSLGILEVWFRYNNRLMILFVTGVVIVVLRLSLHRRKLGCCIIAVILAALYVVLLAWSVSVTLVVSHLPSPRLLPDIANTASAWDFVTSIPTIAASFVNHYNVHTIDQELGSSSSIRSFSCSCVLSILLYLFGGITGVLLFGDSTSDNVLLNFGAIINRQNNIRIISIGMSVMLVYALHLLLVLPFMLGSLRSDFERLIPSRIIPENFQTIWLGAVPLALHGLALLLTQYPHFMNFLCQLNGALVAGSLGFILPAVIALRDPGGIAIFTEKILSSVFGFAMGILFIIATYRYFVNYFSHR 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152411g00001 547 Pfam Transmembrane amino acid transporter protein 141 507 IPR013057 -
Stsc152411g00001 547 Coils Coil 48 68 - -
Stsc152411g00001 547 PANTHER AMINO ACID TRANSPORTER 141 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152411g00001 Stsc-Chr152411 3675 6832 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152411g00001 152 523 Amino Acid or Auxin Permease AAAP Family AT3G56200 32.115 6.79e-47 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152411g00001 K14207 - gmx:100778699 194.897