Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152402g00005 ATGTCTTCAGCAACAATGATCTTCACTCTTCTTCTTCTTCTTGTTCTTGTCCAAACATGTCATGGAGACGCCAACAATAACAACCCTCCTCTGTTCCATCTCTGTTCCAACAATGGAAACTACACACCCTACTCCCCCTACGAATCAAACCTGAAAATGCTCATCAACTCACTCATCTACAAAACCCCTTCAACAGGTTTTGGCCACTTCCAGACCCAACAAGCCTACGGCCTCGCCCTCTGCCGCGGCGACGCCTCCACTCAAGACTGCAAAGCCTGTATCACCGATGCAGCTAAAGAACTCCGCACTCTCTGTCCGTACAACAAAGGTGCAATGATATGGTACGATAACTGCGAGGTCAAGTACTCAGACACCAATTTCTTTGGACAAGTTGATGAGAACACCGAGTTCTATTTGTTGAACACGCAAAATGTGAGTGATGCTGAAAACTTCAACTATGTGGTTAAGGATTTGCTAAGTGTGGTTGCATCTAAGGCTTCTGTGGATCCTAAGCTGTATGAAAGTGGAGACTTGAAGGTTGGTGAGTCTGAGAGAGTTTATGGGTTGGCTCAGTGCACCAGAGACCTTTCTAGCCTTGAGTGCAACAAATGTCTTCATGATGCAATTCAACAGCTTCCCAGTTGCTGTGATGGCAAACAAGGTGGCAGAGTTGTTGGTGGAAGCTGCAACATCCGATATGAGATCTACCCATTTCTCAAACCTTAG 726 0.4601 MSSATMIFTLLLLLVLVQTCHGDANNNNPPLFHLCSNNGNYTPYSPYESNLKMLINSLIYKTPSTGFGHFQTQQAYGLALCRGDASTQDCKACITDAAKELRTLCPYNKGAMIWYDNCEVKYSDTNFFGQVDENTEFYLLNTQNVSDAENFNYVVKDLLSVVASKASVDPKLYESGDLKVGESERVYGLAQCTRDLSSLECNKCLHDAIQQLPSCCDGKQGGRVVGGSCNIRYEIYPFLKP 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152402g00005 241 Gene3D - 133 238 IPR038408 -
Stsc152402g00005 241 Gene3D - 29 127 IPR038408 -
Stsc152402g00005 241 Pfam Salt stress response/antifungal 35 124 IPR002902 -
Stsc152402g00005 241 Pfam Salt stress response/antifungal 143 235 IPR002902 -
Stsc152402g00005 241 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 8 240 - -
Stsc152402g00005 241 ProSiteProfiles Gnk2-homologous domain profile. 133 238 IPR002902 -
Stsc152402g00005 241 ProSiteProfiles Gnk2-homologous domain profile. 29 127 IPR002902 -
Stsc152402g00005 241 FunFam Cysteine-rich receptor-like protein kinase 10 135 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152402g00005 Stsc-Chr152402 12216 13108 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152402g00005 4 240 Pollen Coat Proteome AT4G20670 37.109 3.96e-52 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152402g00005 - - gmx:100527155 300.056