Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152402g00004 ATGTCTTCCACCACCATTCTCTTGTGTGTATCAGTGACTGCCTTTCTTGTCCAAACATGTTATGGAGGAGCAACGGCAGAAGCAACAGGCCCTCTCTTCCACTTCTGTTCAGACTCCGGAGGCAACTTCACAGCACACTCACCCTTCGAATCAAACCTTAAAACCCTAATCAACTCACTCATCTACAAAACCCCTCCAACAGGTTTTGCCGTCTCCACAATTGGCCAACCTCAGAACCAACAAGCCTACGGCCTCGCCCTCTGCCGCGGCGACGCCTCGCCGCAAGACTGCAAAACCTGTCTCTCCGAAGCAACCAAGGAGCTTCGCAGCCGCTGCCAATACAACACTGGTGCAATCATATGGTATGATTACTGCGAATTCAAGTACTTGGACACCGATTTCTTTGGACAAGTTGATAACACTAACAAGTTCTACATGTGGAACTTGAATAATGTCACTGACTCTACTGCATTCAACCATAAGACTAAGGAATTGTTGAGTAAGCTTGCGTTAGAGGCTTCCACGAACCCTAAGTTGTATGCAAGCGGTGAAATGAAGCTTGGTGGTGGTGGTGAATCTAATAATAATAAGATGCTTTATGGGTTGACTCAGTGTACGAGAGACGTGTCTAGCGTTGACTGCAAGAAGTGTCTTGATGAAGCCATTAGCGAACTTCCAAATTGTTGTGATGGGAAACAAGGTGGAAGAGTTGTGGGCGGAAGCTGCAACTTCAGATATGAGATATACCCTTTTCTCAATAACTAA 765 0.4627 MSSTTILLCVSVTAFLVQTCYGGATAEATGPLFHFCSDSGGNFTAHSPFESNLKTLINSLIYKTPPTGFAVSTIGQPQNQQAYGLALCRGDASPQDCKTCLSEATKELRSRCQYNTGAIIWYDYCEFKYLDTDFFGQVDNTNKFYMWNLNNVTDSTAFNHKTKELLSKLALEASTNPKLYASGEMKLGGGGESNNNKMLYGLTQCTRDVSSVDCKKCLDEAISELPNCCDGKQGGRVVGGSCNFRYEIYPFLNN 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152402g00004 254 Pfam Salt stress response/antifungal 36 129 IPR002902 -
Stsc152402g00004 254 Pfam Salt stress response/antifungal 150 248 IPR002902 -
Stsc152402g00004 254 Gene3D - 29 134 IPR038408 -
Stsc152402g00004 254 Gene3D - 139 251 IPR038408 -
Stsc152402g00004 254 ProSiteProfiles Gnk2-homologous domain profile. 31 134 IPR002902 -
Stsc152402g00004 254 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 6 253 - -
Stsc152402g00004 254 FunFam Cysteine-rich receptor-like protein kinase 10 142 251 - -
Stsc152402g00004 254 ProSiteProfiles Gnk2-homologous domain profile. 140 251 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152402g00004 Stsc-Chr152402 9069 9833 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152402g00004 1 254 Pollen Coat Proteome AT4G20670 37.786 4.09e-53 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152402g00004 - - gmx:100527155 348.977