Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152402g00003 ATGTTTAGCTATAGAATAATCCTTCTTAGTCTCTTGTGTTTATGGCTTTCTACCAAAGGAGGCAATAGCACAAGCCCCTTGTTCCGCTACTGTTTCAACCATGAAAACTACACTGACCCGAGCCCTTACGCCACCAACTTGAACCAACTATTCAACCTATTATACACCAAAGTGCCCCCTCACGGTTTCGGACTTGCCTCCACTGGCCAACCCCAAGACCAAGTCAACGGTCTAGCCTTGTGTAGAGGCGATGTCAACACCACAAGCTGCATGTCATGCGTCAATGAAGCATCAAAGAAGCTTCTAGAACGCTGTCCGTACAAGAAAGGTGCAATCATATGGTACGATTACTGCCTCCTGAAGTACTCGAATGAAAACTTCTTCGGTGAAATTGATGAGAAGAACAAGTTCTACATGGTTAACGTGTATGATGTTGAAGGTGATGCTGCGAGTTTCAATGGTAAGGTGAGTGAGTTGTTGAGTAACTTGTCTTACAAGGCTTCTGAGAGTTCTGTGTTGTATGCTAGTGGGGAGTTGAAGTTTGATGATGAGGAGGAGGGTTCGAAAACGGTGTATGGGTTGGCTCAGTGTACAGGGGATCTTGTTGGGAGTAGTTGTAAGAAGTGTCTTGATGATGCTGTTGCTGAGATTCCAGATTGCTGTGATGGGAAACAGGGTGGTCGTGTTGTTGGTGGAAGTTGCTATGTTAGATATGAACTCTACCCTATTGTTGAATCATCCTAG 744 0.4489 MFSYRIILLSLLCLWLSTKGGNSTSPLFRYCFNHENYTDPSPYATNLNQLFNLLYTKVPPHGFGLASTGQPQDQVNGLALCRGDVNTTSCMSCVNEASKKLLERCPYKKGAIIWYDYCLLKYSNENFFGEIDEKNKFYMVNVYDVEGDAASFNGKVSELLSNLSYKASESSVLYASGELKFDDEEEGSKTVYGLAQCTGDLVGSSCKKCLDDAVAEIPDCCDGKQGGRVVGGSCYVRYELYPIVESS 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152402g00003 247 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 8 244 - -
Stsc152402g00003 247 Gene3D - 136 242 IPR038408 -
Stsc152402g00003 247 Gene3D - 24 127 IPR038408 -
Stsc152402g00003 247 ProSiteProfiles Gnk2-homologous domain profile. 25 127 IPR002902 -
Stsc152402g00003 247 Pfam Salt stress response/antifungal 149 241 IPR002902 -
Stsc152402g00003 247 Pfam Salt stress response/antifungal 31 124 IPR002902 -
Stsc152402g00003 247 FunFam Cysteine-rich receptor-like protein kinase 28 28 126 - -
Stsc152402g00003 247 FunFam Cysteine-rich receptor-like protein kinase 10 136 243 - -
Stsc152402g00003 247 ProSiteProfiles Gnk2-homologous domain profile. 133 243 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152402g00003 Stsc-Chr152402 7060 7974 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152402g00003 37 246 Pollen Coat Proteome AT4G20670 40.639 3.51e-47 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152402g00003 - - pvu:PHAVU_005G112700g 348.591