Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152391g00001 ATGAAAGGACAGACACCCTATGCGGTTGTGTTTGTGATACAAGCCATATACGCTGCTATGTTTCTTCTATCAAAAGCAGCATTCGACCATGGCATGAACAATTTCATCTTTGTCTTTTACAGACAGGCCATTGCAACCCTTTTTCTCATCCCTTTTGCTCTCTTCTTCGAATGGAAATCTGCGCCGCCTTTGCATTTCCTCACCTTCTGCAAGATCTTCCTCCTTTCATTCTGCGGGATTACTTTGAGCTTGGATGTATATGGTATTGGTCTTATATACACCTCAGCAACGTTGGCTGCTGCTACCACAAACTGTCTTCCAGTTATCACCTTCTTCTTGGCGCTCCTTCTCCGGATTGAAAGTTTGAAATTAAAGACAACACCAGGAATTGCTAAGCTGATAGGCATTGTTGCATGCTTGGGTGGTGCAGCAACTCTTGCCTTTTACAAGGGTCCTCATTTGAAATTTCTAAGCCATTATCACATTCTAAATTACCATAAAACCCAACAACAACAACAACATGGTCATCATGCTCAATCTCATACATGGATAAAGGGCTGCTTCTTCATGCTCGTCTCCAATACCTTTTGGGGCATGTGGCTTGTGCTACAGGCTTTCGTTATAAAAGGTTATCCTTCCAAGCTTCTTTTCACAACTCTTCAGTGTTTCTTAAGTTCAATTCAATCTTTTGTCATTGCCTTGGCGGTAGAAAGGAACATCGAGGAATGGAAGCTGGGTTGGAATCTCAGGCTCTTATCCGTAGTATACTGTGGGGTTATGGTGACGGGCGTCACATATTACTTACAGACATGGGTCATAGAAATGAAAGGACCTGTGTTTCTAGCAATGTCAACACCACTCAACCTCATTATCACAATCTTCGCCTCCGCAATTATCTTGGGCGACATAATCACTTTGGGGAGCCTTTTAGGAGGGTTGGCGTTGGTTGTAGGACTGTACAGTGTGCTGTGGGGAAAAAGCAGGGAGCAAATGCCCAAAGCCTCACAAGACTTGGAGCAAGTATCGGCTTAA 1032 0.437 MKGQTPYAVVFVIQAIYAAMFLLSKAAFDHGMNNFIFVFYRQAIATLFLIPFALFFEWKSAPPLHFLTFCKIFLLSFCGITLSLDVYGIGLIYTSATLAAATTNCLPVITFFLALLLRIESLKLKTTPGIAKLIGIVACLGGAATLAFYKGPHLKFLSHYHILNYHKTQQQQQHGHHAQSHTWIKGCFFMLVSNTFWGMWLVLQAFVIKGYPSKLLFTTLQCFLSSIQSFVIALAVERNIEEWKLGWNLRLLSVVYCGVMVTGVTYYLQTWVIEMKGPVFLAMSTPLNLIITIFASAIILGDIITLGSLLGGLALVVGLYSVLWGKSREQMPKASQDLEQVSA 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152391g00001 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 40 150 - -
Stsc152391g00001 343 Pfam EamA-like transporter family 8 144 IPR000620 GO:0016020
Stsc152391g00001 343 Pfam EamA-like transporter family 185 323 IPR000620 GO:0016020
Stsc152391g00001 343 PANTHER WAT1-RELATED PROTEIN 6 331 IPR030184 GO:0016020|GO:0022857
Stsc152391g00001 343 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152391g00001 Stsc-Chr152391 864 5927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152391g00001 1 257 Nodulin-like Gene Family AT5G64700 60.465 1.03e-97 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152391g00001 - - gmx:100804562 541.191