Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152385g00004 ATGGACAAATCTCAATTTCCTAACATATTTTCAACCCATCATGAATGGTTTGAAGCCACACTTCAATCCTCAAAATTATCTAAAAATCCCTCATCAAAACAACAATTATTATTGTACTCATATAACCATGCAATGTATGGTTTTAGTGCAACCCTAACTCCCCAAGAATTAAACTCTCTTAGAAACTCTTATGGATTTGTTTCAGCATATCCAGATAGAACAGCCACAATGGACACCACACACACCTTTGAATTTCTCAATTTAGACCCTAATTTTGGGCTATGGAATGCTTCAAATCTTGGTGAGGGAATGATTGTTGGTGTGATTGATAGTGGGGTGTGGCCAGAGAGTGAGAGCTTCAAAGATGATGGAATGGAGAAGGAGTTGCCATTGAAATGGAAAGGGACATGTGAAGAAGGTCAAGAGTTCAATGCATCCATGTGCAACTTGAAGCTCATTGGTGCAAGGTATTTCAACAAGGGTTTGGTTGCTTCAAAACCTAATGTCACAATCAAGATGAACTCACCTAGGGATTATGATGGACATGGAAGTCACACTTCTTCCATTGTTGCTGGAAACTATGTTCATGGTGCCAATTTCTTTGGATATGCCAAAGGTGTGGCTAGAGGCATTGCACCAAGAGCTAGGCTTGCCATGTACAAGGTATCATGGCAGGAGGGCCGTCAAGCTTCCGATATCTTGGCCGGAATGGACCAAGCCATCGCCGACGGAGTCGACGTGATTTCAGCTTCCATGGGGCTTGATAAGATTCCATTATATGAGGATTCAATAGCCATAGCTTCATTTGCAGCAATGGAGAAAGGCATTGTTGTTTCAACTTCTGCAGGTAATGCAGGTCCAAATCTTGGAACCTTACACAATGGAATCCCTTGGGTTATAAATGTGGCTGCAAGCTCCATTGATAGAACATTTGGTAGCTTGGTTCTTGGCAATGGTGAAACTATCATTGGTTGGACATTGTTTGCAGCAGATGCCATTGTTCAAGATCTTCAACTTGTTTATGATGACACTTTATCAGCTTGTGACTCTCTCCAGAGGTTAAGTGAGGTTG 1072 0.417 MDKSQFPNIFSTHHEWFEATLQSSKLSKNPSSKQQLLLYSYNHAMYGFSATLTPQELNSLRNSYGFVSAYPDRTATMDTTHTFEFLNLDPNFGLWNASNLGEGMIVGVIDSGVWPESESFKDDGMEKELPLKWKGTCEEGQEFNASMCNLKLIGARYFNKGLVASKPNVTIKMNSPRDYDGHGSHTSSIVAGNYVHGANFFGYAKGVARGIAPRARLAMYKVSWQEGRQASDILAGMDQAIADGVDVISASMGLDKIPLYEDSIAIASFAAMEKGIVVSTSAGNAGPNLGTLHNGIPWVINVAASSIDRTFGSLVLGNGETIIGWTLFAADAIVQDLQLVYDDTLSACDSLQRLSEV 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152385g00004 357 CDD Peptidases_S8_3 76 307 IPR034197 -
Stsc152385g00004 357 SUPERFAMILY Subtilisin-like 78 315 IPR036852 GO:0004252|GO:0006508
Stsc152385g00004 357 Pfam Subtilase family 101 304 IPR000209 GO:0006508|GO:0008236
Stsc152385g00004 357 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 77 IPR037045 -
Stsc152385g00004 357 Gene3D - 308 345 - -
Stsc152385g00004 357 PRINTS Subtilisin serine protease family (S8) signature 178 191 IPR015500 -
Stsc152385g00004 357 PRINTS Subtilisin serine protease family (S8) signature 101 120 IPR015500 -
Stsc152385g00004 357 Gene3D Peptidase S8/S53 domain 103 307 IPR036852 GO:0004252|GO:0006508
Stsc152385g00004 357 Pfam Peptidase inhibitor I9 8 75 IPR010259 -
Stsc152385g00004 357 ProSiteProfiles Serine proteases, subtilase domain profile. 82 357 - -
Stsc152385g00004 357 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 345 IPR045051 -
Stsc152385g00004 357 FunFam Subtilisin-like protease SBT1.9 1 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152385g00004 Stsc-Chr152385 14267 16220 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152385g00004 1 341 Subtilisin-like Serine Gene Family AT3G14067 45.845 6.24e-95 297