Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152380g00001 ATGGTGTCTAAACTTGAGAGTGTATCTGAGGCGATGGTTAAGCCATTGTCTCCAACCCCTAATCACCTTAGACACTTCAAAATCTCCCTCCTTGATGAGATGGCTCCTTCAGTCTACATCCCAATTGTTTTGTTCTACTCTGCCACTGATATGAGTAGCAGTCTCTTCGGTACCCATGATTTCAAAGCCAAGTCCAACAAGTTAAAGGCTTCCTTATCCAAAGTTCTCACTCTCTATTACCCATTTTGTGGAAGATTCAAAAGCACTTCCTCATCATCTTCCTCCATTGATTGCAATGATGAAGGTGTACCTTATATTGAGTCTAAATTCTCCAAGAACCTTTCAGATATTCTCAAAAGGCCTCAGTCTGAAATGCAAGAGCTTCTGCCATTCGACCCATATAACAACGATTGTGACAAACACATGGTTAGCATGGCGGTTAAAGTGAGTGAATTCGAGTGTGGGGGTGTTGCACTTGGTGTGTGCCTTTCACACAAGATAGCAGATGGTGAAACAACAGCATCATTCCTCAATGCTTGGGCTAAAACTGCAAAGGGTCTTTTCAACGAAGTAGAAGCGCCACAAATGGATGCATCATTGATTTTCAAATCAAGGGGAATAGAATGGGCATTGAATAGTCTCATGGTTGGTGGTGGAGGTGGTAATAATGAAAAACTTGTGACCAAGTGTTTCTTGTTTAGTGCCATGGATTTGTCCAGATTGAGAGTTAGATTTGGCAGTTTCAATGCCACTCGTGTTGAAGCTGTCACAACACTCATATGGAGATCAGCTCTACAAGCGGCAAAAGCAAGCTCCGAAAGACACGGACGAATTAATCTATCAAGTAAGAAAAATTTTCAAAGACTTTTAACAATAACGACGGCTAAGCCGTCGGTATTTACCGACGGCTTAACCGTCGATGACGTGGACGTCGTCAGAAGGGAAGTTGTTGTGGCTATTACCGACG 967 0.4271 MVSKLESVSEAMVKPLSPTPNHLRHFKISLLDEMAPSVYIPIVLFYSATDMSSSLFGTHDFKAKSNKLKASLSKVLTLYYPFCGRFKSTSSSSSSIDCNDEGVPYIESKFSKNLSDILKRPQSEMQELLPFDPYNNDCDKHMVSMAVKVSEFECGGVALGVCLSHKIADGETTASFLNAWAKTAKGLFNEVEAPQMDASLIFKSRGIEWALNSLMVGGGGGNNEKLVTKCFLFSAMDLSRLRVRFGSFNATRVEAVTTLIWRSALQAAKASSERHGRINLSSKKNFQRLLTITTAKPSVFTDGLTVDDVDVVRREVVVAITD 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152380g00001 322 Pfam Transferase family 4 276 - -
Stsc152380g00001 322 Gene3D - 223 292 IPR023213 -
Stsc152380g00001 322 PANTHER F21J9.9 7 275 - -
Stsc152380g00001 322 Gene3D - 2 207 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152380g00001 Stsc-Chr152380 15275 16509 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152380g00001 4 201 Monolignol Biosynthesis Gene Families AT5G48930 29.500 2.92e-18 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152380g00001 K13065 - gmx:100792323 252.677