Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152323g00004 ATGGAAGGAAAAGACCCTGTAAAGGTGATCAGAGATGCGCTCTCAAGAACACTTGTCTTTTACTACCCATTTGCCGGCAGGCTTAGGGAGGGTCATGGCCGCAAGTTGATGGTGGATTGCACTGCAGAGGGTGTTTTGTTCATTGAGGCTGATGCTGACGTCACACTTGATCAATTTGGTGAAGCTCTTGAAACCCCATTCCCTTTCTCTAAAGAATTGCTTTACAATGTTCCTGGCTCGGATGGAATTGTCGGCTGTCCCCTCTTGCTCATACAGGTAACACGCTTTAAGTGCGGTGGTTTTACTTTGGGCATAAGAGTGAACCACACTATGTGTGATGCAACTGGTTTTACACAATTTACGATTGCTTTGGCTGAAATAGCTCGAGGTGCTCATCAACCATCCGTTCTACCAATATGGCAAAGGGAGCTTCTGAGTGCAAGAAACCCACCGCGCATCACATGCAACCATCGAGAATTTGACAAAGATAAAGACATGGTGGAATGGAAGACCATCACTGGCAGCATTGAAAACATGATTGAACGATTTTTCTTCTTTGGACCCACTGACATAGCTTCTCTTTGTAACTTAGTTCTAAATAATCAGGTTGGTAGTGAAACTGAATATACTACATTTGAGCTCATCACTGCATGTCTCTGGCGTTGTCTTACAAAAGCATTGCAACTACCACCAGAAAAACAATTTCGCATGGGTTGTATCGTCAATGCACGTGCTAGATTTAACCCTCAGATTCCAATTGGTTATTATGGAAACGTTCTTGCATTTCCTGTGGCAGTGAGCACCGTGGAGAAGCTTTGTGAAAATCCATTTACATATGCTGTGGAGTTAATTAAGAAAGCCAAAGCGGAGGTAACAGAAGAATATATGCATTCTTTGGCAGATTTATTGGTGATTAATGGACGACCTTTAGGTACAGTAGCATGGTCTTTCATTGCATCAAAGTTGTCTCGTATTGGATTTAGAAAAGTGGATTTTGGGTGGGGCAATGCAGTGCATGGTGGCCTAACTGGGGGCAATGCTTTTGGAGAACTTTATCTCATGGATTATGAAAATGCAAAAAATGGAGAAGAAGGTGTTTTAGTTCCACTTTACTTGCCTGCCAATGCTATGGAGAGGTTTGCAAAAGAACTGGATGGTATGCTTCGGAACCCAAATCAAGCTATCAAGAGTGCTAGATCCCAAACAATTCTCAAGTCTAGCTTGTAA 1227 0.4271 MEGKDPVKVIRDALSRTLVFYYPFAGRLREGHGRKLMVDCTAEGVLFIEADADVTLDQFGEALETPFPFSKELLYNVPGSDGIVGCPLLLIQVTRFKCGGFTLGIRVNHTMCDATGFTQFTIALAEIARGAHQPSVLPIWQRELLSARNPPRITCNHREFDKDKDMVEWKTITGSIENMIERFFFFGPTDIASLCNLVLNNQVGSETEYTTFELITACLWRCLTKALQLPPEKQFRMGCIVNARARFNPQIPIGYYGNVLAFPVAVSTVEKLCENPFTYAVELIKKAKAEVTEEYMHSLADLLVINGRPLGTVAWSFIASKLSRIGFRKVDFGWGNAVHGGLTGGNAFGELYLMDYENAKNGEEGVLVPLYLPANAMERFAKELDGMLRNPNQAIKSARSQTILKSSL 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152323g00004 408 Gene3D - 162 384 IPR023213 -
Stsc152323g00004 408 Pfam Transferase family 7 384 - -
Stsc152323g00004 408 Gene3D - 2 161 IPR023213 -
Stsc152323g00004 408 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152323g00004 Stsc-Chr152323 7100 13532 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152323g00004 5 384 Monolignol Biosynthesis Gene Families AT5G48930 28.861 4.69e-46 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152323g00004 K19861 - gmx:100787907 471.085