Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152323g00003 GTCACACGCTTTAAATGCGGTGGTTTTGCTTTGGGCATAAGAGTGAACCACACTATGTGTGATGGAACTGGTTTTACACAATTTACGATTGCTTTGGCTGAAATGGCTCGAGGTGCTCATCAACCATCCGTTCTACCAATATGGCAAAGGGAGCTTCTGAGTGCAAGAAACCCACCGCGCATCACATGCAACCATCGAGAATTTGACAAAGATAAAGACATGGTGGAATGGAAGACCATCACTGGCAGCATTGAAAACATGATTGAACGATTTTTCTTCTTTGGACCCACTGACATAGCTTCTCTTTGTAACTTAGTTCTAAATAATCAGGTTGGTAGTGAAACTGAATATACTACATTTGAGCTCATCACTGCATGTCTCTGGCGTTGTCTTACAAAAGCATTGCAACTACCACCAGAAAAACAATTTCGCATGGGTTGTATCGTCAATGCACGTGCTAGATTTAACCCTCAGATTCCAATTGGTTATTATGGAAACGTTCTTGCATTTCCTGTGGCAGTGAGCACCGTGGAGAAGCTTTGTGAAAATCCATTTACATATGCTGTGGAGTTAATTAAGAAAGCCAAAGCGGAGGTAACAGAAGAATATATGCATTCTTTGGCAGATTTATTGGTGATTAATGGACGACCTTTAGGTACAGTAGCATGGTCTTTCATTGCATCAAAGTTGTCTCGTATTGGATTTAGAAAAGTGGATTTTGGGTGGGGCAATGCAGTGCATGGTGGCCTAACTGGGGGCAATGCTTTTGGAGAACTTTATCTCATGGATTATGAAAATGCAAAAAATGGAGAAGAAGGTGTTTTAGTTCCACTTTACTTGCCTGCCAATGCTATGGAGAGGTTTGCAAAAGAACTGGATGGTATGCTTCGGAACCCAAATCAAGCTATCAAGAGTGCTAGATCCCAAACAATTCTCAAGTCTAGCTTGTAA 951 0.4143 VTRFKCGGFALGIRVNHTMCDGTGFTQFTIALAEMARGAHQPSVLPIWQRELLSARNPPRITCNHREFDKDKDMVEWKTITGSIENMIERFFFFGPTDIASLCNLVLNNQVGSETEYTTFELITACLWRCLTKALQLPPEKQFRMGCIVNARARFNPQIPIGYYGNVLAFPVAVSTVEKLCENPFTYAVELIKKAKAEVTEEYMHSLADLLVINGRPLGTVAWSFIASKLSRIGFRKVDFGWGNAVHGGLTGGNAFGELYLMDYENAKNGEEGVLVPLYLPANAMERFAKELDGMLRNPNQAIKSARSQTILKSSL 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152323g00003 316 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 292 - -
Stsc152323g00003 316 Gene3D - 1 69 IPR023213 -
Stsc152323g00003 316 Pfam Transferase family 1 292 - -
Stsc152323g00003 316 Gene3D - 70 292 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152323g00003 Stsc-Chr152323 7100 15803 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152323g00003 1 292 Monolignol Biosynthesis Gene Families AT5G48930 26.384 4.03e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152323g00003 K19861 - var:108341556 343.584