Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152319g00003 ATGCAACAGTTTGACCCACACCACCAGCCAGCAGCCGCTACACTTTCAGTCTCTCTCACCGTCACTCTCGCTCCAGCCACCACCACACTCGGAAGTGAGCTTCCGACACCAACCCGTTGCAGCGCCGCATTCTACCTAGTTGCCATCTCATCCCGTCGCCGTCGCCGTCGTAGCAGCGCCGTGGTAGCGTCGTATCTTCCCGAATCCTTGTTCGGCATCTTTAAGCTCGCAACCGTGTCAACCGTTATCACTGGCTCCCTTCCTTTTCGCTCTCAGTCATCGTTGTCGGTTACGATCGTGCTTGCGTCTGTGCTATCCGTCTCCACTGCAGCAACAGATTTTGGCACTGCAAAGTTTTTAAGCTCTGGCACTTCAAGTTGGACCTCAGTAGCTGGTTCTTATGGCTACATGGCTCCAGAGCTAGCACAAACAATGAGGGTCACTGACAAGTGTGATGTGTATAGTTTTTGGAGTGGTGGTGTTGGAGTTGTTAGTTTAGGCAGTTCTCAGTCCGTTGTTACAGAGATACAACAAAACCCCAGTGATTTTTATGCTGAAAGCAGAGAAGAGAAAATGCTTAGTCCACTGATGGAGGCACCGGGAGAATTGGAGTTCAGAAAGGCCTTTCTGCTGTTGAGTTACATTGGAGGGGTCCTATTTTACATTGCTCAAGAACACACAAAGCAATATAGAGGAACAAGAACACTCTTCATACTCATTGAACTTGTAGTAGGTGGCATTGCTTTGGACAATTTTTCTTTATCAGCAAAAAATGAGCTATGGACATTCTTATATGGGCTCAGATTGAATGAAGAATTCTTTTCACAACTTAGAGTGGAGTTAGGACAGCTTCGATTTGCAGTTAACAAAACCGAGGCCACAGAGGAGAGGCTGATTGAGTTGGAGGCTCTGGAGAAAGCCATACAAGAAGGAATAGTGTGGGAATATGTTTTGGAAAATAATGGGAGAAGTCAATACGTGCCTTTTCAAACCTTCTTTGCTGATCTTCAAAAGCCTCAAGGTGAGTTTGATGGAAAAGCATGTGCAGTTGTTGGGCAGAGCAGTCTCATGACATTTTCTTGGCAAAGATGA 1092 0.4652 MQQFDPHHQPAAATLSVSLTVTLAPATTTLGSELPTPTRCSAAFYLVAISSRRRRRRSSAVVASYLPESLFGIFKLATVSTVITGSLPFRSQSSLSVTIVLASVLSVSTAATDFGTAKFLSSGTSSWTSVAGSYGYMAPELAQTMRVTDKCDVYSFWSGGVGVVSLGSSQSVVTEIQQNPSDFYAESREEKMLSPLMEAPGELEFRKAFLLLSYIGGVLFYIAQEHTKQYRGTRTLFILIELVVGGIALDNFSLSAKNELWTFLYGLRLNEEFFSQLRVELGQLRFAVNKTEATEERLIELEALEKAIQEGIVWEYVLENNGRSQYVPFQTFFADLQKPQGEFDGKACAVVGQSSLMTFSWQR 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152319g00003 363 Gene3D Transferase(Phosphotransferase) domain 1 81 198 - -
Stsc152319g00003 363 PANTHER LEUCINE RICH REPEAT KINASE 2 108 156 - -
Stsc152319g00003 363 SUPERFAMILY Protein kinase-like (PK-like) 112 156 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152319g00003 Stsc-Chr152319 12398 16594 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152319g00003 96 175 Receptor kinase-like Gene Family AT1G75820 46.341 2.85e-10 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Stsc152319g00003 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152319g00003 - - gmx:100809137 88.1965