Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152317g00001 ATGCCTTCATCTTCTTCTTCTTCTTCTTCTTCATCATCAACAACAACTCTTCAATGGTTAAGCCTAGTAGCAATAATTTGGCTCCAATCCATAAATGGAACAAACACAAATTTCCCAGCATACTCATCCCAACTCAAAGAGCTTCTCTCAATCTCCCAAATCCAACTCAACAACCTTGCTTTTGCCTCAGATGCTGGAAAACTCTTTGGCTGGTTCTCTGGCCTTGCTTCTCTCTACCTTCCCCTTTGGCTTGTCCTCATCATTGGTTCCACTCTTGGCCTCATTGGCTATGGTCTTCAATTTCTCTTCCTAACCCACCACATCTCTAATCTCTCTTATTGGCATGTTTTCTTGCTAACCTTCCTTGCTGGCAACAGCATTTGCTGGATCAACACAGTTTGTTATGTTGTCACAATCAAGAATTTCTTGTCACATAGCCAAGTAGCTGTTGGAATCACAACTAGCTACCAAGGTTTGAGTGCTAAGGTTTATACCAATGTTGTTGACGCTTTCTTCTCTCCTAGGAACAAGGCCAGAGCATTTTTGTTCCTTAACTCTGTTTTGCCTCTGGCTATTGCCTTAGTTGTAGCTCCTATCCTTAGAGAAACCAAAAAAAACACACCAAATTTCAATCACAATAATCACAATTTTTATGGGTTTGGTGTGGTTTTTGTGATCACAATTGCAACTGGGGTTTATGCTGTGGTTAGTAGCTTGGGATTTGTGAGTAGAAAGATTTCATCACTTGGGGTTCTAATTGGTATCTTAGTGTCACTTTTCTTGCCACTATTGGTTCCAATTTCAGTGAAGATCATTGAGTTAGTTAAGTCATGGCATGAAAATAAGGAGAAGCTTAGAGTGTACCATTACACTATGGAGGAGAATTACACCACAACCAATGAGGTGAAAGAGAGTGAAGGAGAAGAAGAGAAAGAAGTGTGTGTTAAAGAAGAAATTGGGGTGAATTTGATGGTGAAAAGAATAGATTTTTGGCTATATTTCTCTGTGTACTTATTTGGTGCAACAATTGGTTTGGTGTATCTTAATAACTTGGGACAAATTGCTGAGTCAAGAGGAAGCTCTAACACTTCATCTTTGGTGTCTTTGTCTTCATCTTTTGGTTTCTTTGGACGTCTCATGCCATCTCTCATGGACTATTTCCACAGGGGAAAATCAAGAATTTCAAGGCCAGCTTGCATGGTGGCACTAACTGCACCAATATCATGTGCATTCTTCTTACTACAAAACAGCACCGAAATCTCACTTTACATCAGCACTGCAGTTATTGGCGTCTGCACCGGAGCAATCACTTCCATTGCTGTCTCCACAACAACCGAGTTATTTGGAACAAAACATTTTTCGGTGAACCACAACGTTGTTGTTGCTAACATTCCAATGGGGTCCTTCATTTTTGGTTATTCAGCTGCTATTCTCTACCGTAAGGAAGGGCATAATAGTAATATCACTAATGGTCATGGTCAATGCATGGGAATGGATTGCTTTGCTACCACTTTCAAAATTTGGGGTTGTTTTTGTTTTCTTGGAACTTTCTTAGCTCTCATTCTCCACGCCAGGACTCGAAATTTTTACTCGCAAAAACCAATACGAAATTAA 1614 0.4002 MPSSSSSSSSSSSTTTLQWLSLVAIIWLQSINGTNTNFPAYSSQLKELLSISQIQLNNLAFASDAGKLFGWFSGLASLYLPLWLVLIIGSTLGLIGYGLQFLFLTHHISNLSYWHVFLLTFLAGNSICWINTVCYVVTIKNFLSHSQVAVGITTSYQGLSAKVYTNVVDAFFSPRNKARAFLFLNSVLPLAIALVVAPILRETKKNTPNFNHNNHNFYGFGVVFVITIATGVYAVVSSLGFVSRKISSLGVLIGILVSLFLPLLVPISVKIIELVKSWHENKEKLRVYHYTMEENYTTTNEVKESEGEEEKEVCVKEEIGVNLMVKRIDFWLYFSVYLFGATIGLVYLNNLGQIAESRGSSNTSSLVSLSSSFGFFGRLMPSLMDYFHRGKSRISRPACMVALTAPISCAFFLLQNSTEISLYISTAVIGVCTGAITSIAVSTTTELFGTKHFSVNHNVVVANIPMGSFIFGYSAAILYRKEGHNSNITNGHGQCMGMDCFATTFKIWGCFCFLGTFLALILHARTRNFYSQKPIRN 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152317g00001 537 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 19 531 - -
Stsc152317g00001 537 Pfam Nodulin-like 18 267 IPR010658 -
Stsc152317g00001 537 SUPERFAMILY MFS general substrate transporter 28 528 IPR036259 -
Stsc152317g00001 537 Gene3D MFS general substrate transporter like domains 214 526 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152317g00001 Stsc-Chr152317 3315 6501 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152317g00001 13 534 Nodulin-like Gene Family AT2G30300 50.095 4.97e-159 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152317g00001 - - aip:107616135 836.639