Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152306g00003 ATGAGACATGAGGTCTGTCACGGACAAAGAAACCCTCTTTGCTTTCAGCGTTTCACGCCGTCGCCAAAGTCTCATTTTTTGCTCTCTAATCTGCTCTTCTCTTCTCTCGTTGCTCAACTCTCACCGTTACAAACCCCTTCTCTATCTAACCCTAAAACTTGTATTCCGAACAACACCACCAACCCCACTCATGTTCTGCACTTCATAATCACAATCACACACTTCCACTGTTTCATACTCATCAATAACCTTGCCTTCACCCCACAAGCTGCTCTAACTCTAACCACCTCAAAACGATTTCGTTTCAATACCCCACACAAGGCGGACATAGTCCTCGCATTCTTCAAAATCCATGGATTCTCCAATTCCCAAATTGCCACCATTGTTACCAAGCTACCCCCAATACTTGCATCCAATCCACAAAGGATCCTGCCAAAGTTCCAATTTTTAGCCTCCAAAGGTGCTTCCACCCATGACATTGTTCTGCTAGTAACTAGGCACCCTAGATTCTTGCATTTGAGCCTCGAGAACCGCATAATCCCTACTTATGGATTGCTGAAAACCTTGTTTCAATCCGTTGAAAAATTGCTCAGCTGCATTGTTTCTTGCCCTGCCTCCTTAATGGATTCTCGCTTGCCGAAAAACATCAAGTTGTTGGCTGATGCCGGAGTCTCTGACTCCGCCATTGGCCATTTGTGTCGTACCAGAATGTCTGTGCTCATGTCTGCTGACTTGGGGAAGCCTGTGGATGAAGTAAAGAAATTAGGGTCTGATCCTTCATTGGTTAAGTTTGCTATAGCTTTGCAAGCCATAAAGACCATACCAAAATCGCTGTGGGACGCCAAAGTTGATGTCTTGAAGAGATGGGGTTAG 873 0.4513 MRHEVCHGQRNPLCFQRFTPSPKSHFLLSNLLFSSLVAQLSPLQTPSLSNPKTCIPNNTTNPTHVLHFIITITHFHCFILINNLAFTPQAALTLTTSKRFRFNTPHKADIVLAFFKIHGFSNSQIATIVTKLPPILASNPQRILPKFQFLASKGASTHDIVLLVTRHPRFLHLSLENRIIPTYGLLKTLFQSVEKLLSCIVSCPASLMDSRLPKNIKLLADAGVSDSAIGHLCRTRMSVLMSADLGKPVDEVKKLGSDPSLVKFAIALQAIKTIPKSLWDAKVDVLKRWG 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152306g00003 290 PANTHER CGI-12 PROTEIN-RELATED 80 287 IPR003690 GO:0003690|GO:0006355
Stsc152306g00003 290 Pfam mTERF 112 255 IPR003690 GO:0003690|GO:0006355
Stsc152306g00003 290 SMART mt_12 161 192 IPR003690 GO:0003690|GO:0006355
Stsc152306g00003 290 SMART mt_12 126 156 IPR003690 GO:0003690|GO:0006355
Stsc152306g00003 290 Gene3D Transcription termination factor 3, mitochondrial 87 244 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152306g00003 Stsc-Chr152306 10760 11747 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Stsc152306g00003 mTERF 4.1e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152306g00003 K15031 - gmx:102666739 189.889