Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152305g00001 ATGGCAAGGAGGTCAAGAAGAAGAAAACAAGCGCATTTAGCTGACCTTGAGATGCAGGTAAAAACTGGTGTTCAAGCAGTTGAAAAGCTGAAACTGGAAAATGCATCCCTATACAAGGAGTTTAACGATGCTAGACAACAATTTCATGAGGCGAATACGAGAGCTAAGGTACAGAGAAAAGAAGTTAGGAGCAAAAGAAATAGAAGAAGAAGAAGAAGAAAACAGAGAAACAGAGCTTGGAAAGCACTGAACCAACGCCTAGACCACGCCATGACTTGGGCCAGGAGTGATTCAGGCCCAACACCACGCCATGGCCGCGCCCTAACCACGCCTAGGCGTGGGCTTTCACCACTCACCACGCCTAGGCGTGGTGCACCAAGGCCCAATCCACGCCAGAACCAAGTTACAGCATGCTCCAGGCGTGGCCAAGCACCATGA 438 0.4954 MARRSRRRKQAHLADLEMQVKTGVQAVEKLKLENASLYKEFNDARQQFHEANTRAKVQRKEVRSKRNRRRRRRKQRNRAWKALNQRLDHAMTWARSDSGPTPRHGRALTTPRRGLSPLTTPRRGAPRPNPRQNQVTACSRRGQAP 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152305g00001 145 CDD bZIP_plant_GBF1 2 49 IPR045314 GO:0003700|GO:0006355
Stsc152305g00001 145 Gene3D - 1 52 - -
Stsc152305g00001 145 MobiDBLite consensus disorder prediction 126 145 - -
Stsc152305g00001 145 MobiDBLite consensus disorder prediction 49 145 - -
Stsc152305g00001 145 MobiDBLite consensus disorder prediction 59 80 - -
Stsc152305g00001 145 Coils Coil 13 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152305g00001 Stsc-Chr152305 3987 5813 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152305g00001 2 87 bZIP Transcription Factor Family AT5G24800 39.773 4.78e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152305g00001 K25784 - mtr:25490078 68.1662