Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152284g00001 ATGAACATGTATGATAACAACAATGAACAACCAAAACAGCTCACGATCCTGGTGATCGATGAGCAAACTCCTCTTCTACTATCAGAGACAAAGGCCGGTGGCCACCCGGCAGCATCATTTACAGGGTCGGTGTTCAATTTGTCGACGACCATCATCGGTGCCGGGATCATGGCCTTACCGGCTACCATGAAGGTTCTAGGCCTTGCCTTGGGGGTTGCCGCCATCGTCGTTCTTGCTCTTCTTGCTGAGTACTCTTTGGAGGTTCTAATGAGGTTCAGCAAAGTCGGGAATGCTGTAACTTACTCTCAAGTCATGGAGTATGCATTTGGAAGTGTTGGAAGAAGGCTGTTTCAGATATGTATCTTTGTCAACAATTTTGGAATACTTGTTGTCTATATGATTATAATTGAAAACATCACAGAAAGTGACATGGAATTCTCTCACACATGA 450 0.4467 MNMYDNNNEQPKQLTILVIDEQTPLLLSETKAGGHPAASFTGSVFNLSTTIIGAGIMALPATMKVLGLALGVAAIVVLALLAEYSLEVLMRFSKVGNAVTYSQVMEYAFGSVGRRLFQICIFVNNFGILVVYMIIIENITESDMEFSHT 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152284g00001 149 Pfam Transmembrane amino acid transporter protein 38 137 IPR013057 -
Stsc152284g00001 149 PANTHER AMINO ACID TRANSPORTER 31 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152284g00001 Stsc-Chr152284 1607 4380 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152284g00001 9 146 Amino Acid or Auxin Permease AAAP Family AT5G38820 47.887 6.37e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152284g00001 K14207 - qsa:O6P43_025608 145.206