Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152281g00003 ATGGCGAAAATTCTAGGAACAATTGCAAGTGTTGGAGGCGCAACTGTGATTACTCTATACAAAGGACCTCCTCTTCTCCACCTGCAGACACCTCAAAGGCAACAAGACAGCCACATGCATCAGTCATCAACCAAAGTTCAGAACTGGACCTGGGGTTGCATATACTTATTTGGACATTGCTTGTCTTGGGCTGCTTGGATGGTTTTTCAGGCACCTGTGGTGAAGAAGTATCCAGCTAAACTATCACTCACTTCCTTTACATTTTTCTTTGGATTAATTCAGTTCCTGATTATAGCAGCCTTTTTAGAAACTGATATGGAGCGTTGGAAGATCATATCAACACAAGAGCTTCTTACCATCTTATATGCTGGAATTGTATCATCGGGGGTTGTTATATCTTTGCAAACATGGTGTATTCAAAAGGGTGGCCCAGTATGTGTTGCTGTGTTTCAGGATTATCGGGGCAATTGTGATAATGGTTGGGCTCTACTTAGTCCTATGGGGGAAGAGCAAACAGAAGAATGTGAGTATCGGGGAAAAGGCATCACTAACGCAAGCTTTGCTCAACGATGA 573 0.4293 MAKILGTIASVGGATVITLYKGPPLLHLQTPQRQQDSHMHQSSTKVQNWTWGCIYLFGHCLSWAAWMVFQAPVVKKYPAKLSLTSFTFFFGLIQFLIIAAFLETDMERWKIISTQELLTILYAGIVSSGVVISLQTWCIQKGGPVCVAVFQDYRGNCDNGWALLSPMGEEQTEECEYRGKGITNASFAQR 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152281g00003 190 PANTHER WAT1-RELATED PROTEIN 1 151 IPR030184 GO:0016020|GO:0022857
Stsc152281g00003 190 Pfam EamA-like transporter family 51 151 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152281g00003 Stsc-Chr152281 13491 14327 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152281g00003 1 151 Nodulin-like Gene Family AT3G18200 61.589 2.98e-58 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152281g00003 - - gmx:100812601 245.358