Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152263g00001 ATGCATGTCTTTGAGTATACAAAGATTGATCCTAGGTTTAACGAGGCTTTCAACAAAGCAATGCACAACTCCTCCACTATATTAATGAAAAGGATTTTTGATGTCTACAAAGGCTTTGATCACATCAATAAACTAGTAGATGTTGGTGGTGGTGTTGGGGCAATTATCAAATCAATCACTTCCAAATACCCTCATATTCATGGCATCAATTTTGATTTGCCTCATGTCATACAACTTGCCCCTGCCTATCCTGGTGTGGAGCACTTTGGAGGAGATATGTTTGAGTGTGTTCCAAATGGAGATGCCATTCTAATGAAGGTTGGGTCTGATCTGCATGCATGA 342 0.3977 MHVFEYTKIDPRFNEAFNKAMHNSSTILMKRIFDVYKGFDHINKLVDVGGGVGAIIKSITSKYPHIHGINFDLPHVIQLAPAYPGVEHFGGDMFECVPNGDAILMKVGSDLHA 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152263g00001 113 PANTHER O-METHYLTRANSFERASE 4 107 IPR016461 GO:0008168
Stsc152263g00001 113 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 113 IPR016461 GO:0008168
Stsc152263g00001 113 Gene3D - 2 32 IPR036388 -
Stsc152263g00001 113 Gene3D Vaccinia Virus protein VP39 14 106 IPR029063 -
Stsc152263g00001 113 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 106 IPR029063 -
Stsc152263g00001 113 Pfam O-methyltransferase domain 2 106 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152263g00001 Stsc-Chr152263 357 844 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152263g00001 1 106 Monolignol Biosynthesis Gene Families AT5G54160 63.208 8.03e-45 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152263g00001 K13066 - ahf:112762943 174.481