Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152256g00003 ATGTTTGGAAAATATTCTGAAAAGTCTGACATCTTCAGTTTTGGAGTTATGATTTTGGAAATTGTTAGTGGCAAAAAGAATTCAAGTTCTTATGACTACTCTTACTCCAGCGATGGTCTCTTGAGCCATGCTTGGAAGCAATGGAGAGATGGGACACCATTTCAAATATTGGACCCAAATCTACATGAATCGTGTTCTCAAATGGAAGTGATTAGATGCATCCAAGTTGGTTTACTGTGTGTTCAAGAAAATCCTAGTGATAGGCCACAAATGGCAGAAGTAGTTTCATATCTAAGTAACCTCTCCATTGAGTTGCTATCACCTCACGAGCCTGCCTTTTTTGTTCATGGTAGAATGAATCCAAATATGGTCGCAATGGAAGAAGATTCAGGGCACCTAAGCAATAGTTCCACTCAACATTCACTCAACGAAATGTCTATTAGTATATCTGTTCCACGATAA 462 0.3853 MFGKYSEKSDIFSFGVMILEIVSGKKNSSSYDYSYSSDGLLSHAWKQWRDGTPFQILDPNLHESCSQMEVIRCIQVGLLCVQENPSDRPQMAEVVSYLSNLSIELLSPHEPAFFVHGRMNPNMVAMEEDSGHLSNSSTQHSLNEMSISISVPR 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152256g00003 153 Gene3D Transferase(Phosphotransferase) domain 1 1 108 - -
Stsc152256g00003 153 SUPERFAMILY Protein kinase-like (PK-like) 3 124 IPR011009 -
Stsc152256g00003 153 Pfam Protein tyrosine and serine/threonine kinase 3 98 IPR001245 GO:0004672|GO:0006468
Stsc152256g00003 153 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 2 150 - -
Stsc152256g00003 153 MobiDBLite consensus disorder prediction 129 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152256g00003 Stsc-Chr152256 5516 6915 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152256g00003 3 153 Receptor kinase-like Gene Family AT4G11480 44.371 5.97e-42 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc152256g00003 PK_Tyr_Ser-Thr 2.3e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152256g00003 - - aip:110262495 258.84