Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152199g00001 ATGGAAGATTTTATAAAGGAGAATTTGTTCGACAATGTTACGAAAATTGATGAACACAACTACCTAGTTTGCTACAAAGCTCCACCCAGGATTGTTTCAGATGGAATATGGGGTGGCCAAAAAAATGGAAGGAAACCAATGAAATCGTTTCTGCCATTGTTTGAGTTGCAAGTGCTTATAATTTTTGTTGTCACACAAATCTGCCATCATCTTCTCTTCAAGCGATTGCGACTCCCTTTTCTCGTTTCACAAATCATGGCTGGGATTATTATAGGTATCTCAATTCAAGAAGAGGCAACACGTGAAGTGATGGCTAAGTTATTTCCATTTGGGAGCCATGACGTTATTTCCACAATATCATCAATTGGTTTTGTTCTTTTCATCTTCATAAACGGCGTTGAAATGGATTTCTCCATGATAACAAGAACAGGGAAAAAGGCATGGACACTCGCCATGATCGGACTAGCACTACCCACGCTCATTGCCTACCCACTCCTCCGATATGTTTTAGTTGCAAAGTTAGATCTTAATTCGATGAGCACGGATCTCATGGTTGCTGGCGGTGTGCACAACCTGGTTTCCTTCGCAGTCATTTACAACACCCTAAACGGGCTCCAGATGCAGAACTCGGAGCTCGGAAGACTGGCATTGTCGACGGCGTTAGCTAGTGACATACTGAGCACGACGATGGCCTGCACCATCAAGGCTGCCTTAGCTGTCGGCCTGAAGGCGAAAATCTTGAACTCGATCTACTTACTCGCCTTCGTTATACTTATTCCATTGCTTTTCAGACCTATAATGTTTTGGGTCATAAAGAACACACCAGAAGGAAGGCCAGTTAGCAATGGCGTCGTTTACCTCATCATCTTGATGGTTTTTGGTTTGGGTTGGATTTCGATTAAGATAAACCAAGATTTTCTGCTTGGAGCTTTCATATTAGGGTTAGCTGTGCCTGAAGGGCCTCCATTAGGATCAACTTTGGTGAAGAAGCTTCGATTCTTTGGCAACTGGTTCTTTTTGCCAATCTTTGTTGCCACGTGTGCTATGAAAGCAGATTTTTCATTCAACCGTGAACCCAATGTGGTTATAGCTACTTCTCTTATGTCACTAATAATACACGTTGTGAAAACACTCGCAATATTTTTACCTGCCTTGTGTTGCAAGCTTCCATTCAGTGATGCTTTGTCTCTTGCACTTATTTTGAATAGCAAAGGGGAAATGGAAGTTGGAGTAACCAGCTCCCAATTTGATAAACAGATGATTGGTGGGCAAGCATATGGAACAATGTTGATTAGCATAATGGTGACAGCAAGCATTGTTCAATGGTCTGTAAAGTCTCTTTATGATCCTTCAAGAAAATATGCTGGATACCAGAAAAGGAACCTCATGAGCATGAAACCTGATTCTGAGTTGAGGATACTCACCTGCCTTCACAAAAAGAGCCACATTGTACCCATAACCAATATCATTGACCTCTTTTTTCCAACACTTGAAAACCCAATGACTGTTGATGTCTTGCATCTCATAGAGCTTGTTGGTCGCTCCTTACCTGTGTTTGTCTCCAATCGTCACCAAAGGGTTAAATCAAGCCACAAGGCATACTCCGATGACGTCATCATCGCTTTCGATGTATACGAGCATGATAATTCAGGTGCTGTGGTAGTGAACACTTACACATCAATATCCTTGCCAACCCTAATGCATGAAGATGTTTGCAACCTGGCTTTGGACAAAGTAGCATCCATGGTAATCCTTCCATTTCACCAAAGATGGTCCATCGACGGCACAATCGAATGCGACGACAAGAACGTGAGGGCCTTAAACAACAAGGTCCTAGACATAGCTCCATGTACAGTCGGAATCCTAGTAACCAGAGGCCAACACTCCATAAAAGAATCACACACTCGATTGGCAGTGATTTATTTGGGTGGAAGAGACGATCTAGAAGCTTTGTGCATAGCAAGAAGAGCAATCAAGAACCCGAGGGTGCAGCTAGTCGTTTACAGACTTGTCCACAAACACTACTTGCCGAGATATACTGACGATTTATTAGAGGAGTTTATAGGGTCGTTTAACGCGATCGGAAACGTGTGCTGCAAGGAGGTTGTGGTTGAGGAAGGATCAAAGACAGCTTCATTCATGCGTGACATAGTGAATGAGCATGACTTCTTCATAGTTGGTAGAAGGCATGAGCTTGATTTGCCTCAATTAGAAGGGCTTACAAGTTGGAGTGAGTTTCTTGAATTAGGTGTCATTGGTGATTTTCTTGCCTCACCTGATTTCCGAAGCCGTGCTTCTATTTTAGTTGTGCAACAACAAGTGTCCAAGACCCAAAAATAG 2340 0.4269 MEDFIKENLFDNVTKIDEHNYLVCYKAPPRIVSDGIWGGQKNGRKPMKSFLPLFELQVLIIFVVTQICHHLLFKRLRLPFLVSQIMAGIIIGISIQEEATREVMAKLFPFGSHDVISTISSIGFVLFIFINGVEMDFSMITRTGKKAWTLAMIGLALPTLIAYPLLRYVLVAKLDLNSMSTDLMVAGGVHNLVSFAVIYNTLNGLQMQNSELGRLALSTALASDILSTTMACTIKAALAVGLKAKILNSIYLLAFVILIPLLFRPIMFWVIKNTPEGRPVSNGVVYLIILMVFGLGWISIKINQDFLLGAFILGLAVPEGPPLGSTLVKKLRFFGNWFFLPIFVATCAMKADFSFNREPNVVIATSLMSLIIHVVKTLAIFLPALCCKLPFSDALSLALILNSKGEMEVGVTSSQFDKQMIGGQAYGTMLISIMVTASIVQWSVKSLYDPSRKYAGYQKRNLMSMKPDSELRILTCLHKKSHIVPITNIIDLFFPTLENPMTVDVLHLIELVGRSLPVFVSNRHQRVKSSHKAYSDDVIIAFDVYEHDNSGAVVVNTYTSISLPTLMHEDVCNLALDKVASMVILPFHQRWSIDGTIECDDKNVRALNNKVLDIAPCTVGILVTRGQHSIKESHTRLAVIYLGGRDDLEALCIARRAIKNPRVQLVVYRLVHKHYLPRYTDDLLEEFIGSFNAIGNVCCKEVVVEEGSKTASFMRDIVNEHDFFIVGRRHELDLPQLEGLTSWSEFLELGVIGDFLASPDFRSRASILVVQQQVSKTQK 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152199g00001 779 Gene3D - 54 455 IPR038770 -
Stsc152199g00001 779 PANTHER CATION/H + ANTIPORTER 30 774 - -
Stsc152199g00001 779 Pfam Sodium/hydrogen exchanger family 60 438 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152199g00001 Stsc-Chr152199 4019 7739 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152199g00001 22 773 Antiporter Super Family AT5G22900 34.363 1.01e-150 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152199g00001 K26731 - gmx:100785062 847.04