Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152186g00001 ATGCAGACTCATGAATATTTTGTCCCAGAAAAGATGGCACTTACTCTGGCAGGTGAATCAGTTGATAATTATATGAACGCCCCACTTGCTTCTACCCTTGATGTAGCCTTGCCTCCAGGTGTAAGGCAGACAATGCCCTTTGGGAGAGTTAAATTGCAGCCGTCTGAGGTTTGCCCAAGGAATTTCATTATCTTTGATCAAACAAATCAACAAAGCAGGATTATGTTCCATCCTGCAATGACATACAGGTTCAATACTCCTGGTTTTGATACTCAAGCTACTTATCCCCAGGATTTTGAGAAGAGTAAAGTCAATCAAATGGAAAGAGATTTGCAATCTCCGTTTGAAGAGGATTCTAATGACATTGCTGCTTTGCTGAGCTTGGAAATGGATGATGAATCAGAAGACAACATGGATGAGGAAGAAGTCAGCACCGCAAGGACCCATGACAACTATGAAAGTACATTGGATACTTGCTCGAGTTACTGCTCAAAATCATCAAAGAGGAGGTTGTCATCGAGTCTAGAGAAGTCTGCCGGGGCTACGGGTGACTGCAACACCGAAAGAAAGCACCAGGAGATGAAGAGAATGGTGAAGATGCTGAGAAGGATTGTGCCCGGTGGTGGTAACCAAATGGATGCAGTCACCGTTTTAGATGAAGCTGTTAAGTACCTCAAATCTCTTAAGGTTGAAGTGGAACAATTTGGAGTTGGACCATGA 720 0.4333 MQTHEYFVPEKMALTLAGESVDNYMNAPLASTLDVALPPGVRQTMPFGRVKLQPSEVCPRNFIIFDQTNQQSRIMFHPAMTYRFNTPGFDTQATYPQDFEKSKVNQMERDLQSPFEEDSNDIAALLSLEMDDESEDNMDEEEVSTARTHDNYESTLDTCSSYCSKSSKRRLSSSLEKSAGATGDCNTERKHQEMKRMVKMLRRIVPGGGNQMDAVTVLDEAVKYLKSLKVEVEQFGVGP 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152186g00001 239 MobiDBLite consensus disorder prediction 132 151 - -
Stsc152186g00001 239 Gene3D - 185 236 IPR036638 GO:0046983
Stsc152186g00001 239 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 192 234 IPR036638 GO:0046983
Stsc152186g00001 239 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 178 228 IPR011598 GO:0046983
Stsc152186g00001 239 PANTHER TRANSCRIPTION FACTOR BHLH145 25 237 IPR037546 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152186g00001 16 238 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G29950 40.000 7.41e-38 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152186g00001 - - gmx:100791998 307.76