Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc152183g00002 | ATGAAAGGGTTTGGGTGTTCATGTGGAGCATGCAAGTACCTAAGGAGAAGGTGCACAAGAGATTGTGTATTTGCTCCATACTTCTCGTACGATGAGGCATCAACCCATTTTGCGGCGGTTCATAAGGTGTTTGGTGCTAGCAACGTCTCTAGGCTGTTGCTACACCTTCCGTTGCACAACAGAAGTGACGCTGCTATCACCATATCTTATCAGGCTCTCGCTCGCATGCATGATCCTATCTATGGTTGTCTTTCTTATATCTATCTATTGCAGCAACAGGTTGCAAGCTTGCATAGGGAGATAGATGATATACTAAGGAAGAATTTCATGATGAAGAATTCATGTTTTGGTTTTGAGAATTATTATGGCAGTGTTCAATCGCCGATGAACACCAACAACGGGATAGAGAATATTATTGTGCAAGAAGGAATTAGTGACGGAGAAAGTAGTAGCAGAATGTATCAAAGCTTATTATCGATGGAGCCAAATAATAATGAATTATTATTTGAAGAACATAATTTATTATATGGTGAGGCAGATCCCATCTCTCTGGAGAAGTTTCTATCGGGAATTGACCAGGATGTGCTCCTTAATCATCCATGGTTCAAGCACAATAATAATAATTAA | 627 | 0.3987 | MKGFGCSCGACKYLRRRCTRDCVFAPYFSYDEASTHFAAVHKVFGASNVSRLLLHLPLHNRSDAAITISYQALARMHDPIYGCLSYIYLLQQQVASLHREIDDILRKNFMMKNSCFGFENYYGSVQSPMNTNNGIENIIVQEGISDGESSSRMYQSLLSMEPNNNELLFEEHNLLYGEADPISLEKFLSGIDQDVLLNHPWFKHNNNN | 208 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc152183g00002 | 208 | ProSiteProfiles | LOB domain profile. | 6 | 108 | IPR004883 | - | |
Stsc152183g00002 | 208 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 1 | 117 | - | - | |
Stsc152183g00002 | 208 | Pfam | Lateral organ boundaries (LOB) domain | 7 | 102 | IPR004883 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc152183g00002 | Stsc-Chr152183 | 14683 | 15394 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc152183g00002 | 1 | 124 | AS2 family | AT5G06080 | 62.097 | 4.52e-51 | 161 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Stsc152183g00002 | LOB | 1.1e-32 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc152183g00002 | K13945 | - | gmx:100787638 | 226.483 |