Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152178g00001 ATGCAAGAAACCATGGATATGCCAAATATGCCAAATATGACTGATAATGGCACAGTGCTTTTCTCTGGCTGGCCAAACCACAGTGCTGGCATGTACACATTGGCACTCTTCTCTGTTTTCTTCTTATCACTGGGCATGGAGATTTTCTCTTTCGAGCCGCCGGTTCGCCATCCGGCTCTCGGAGTGGCGGTTCAGTTCGTTGTGTACTGCTTCTTCCGGATCAGCTTCGTCTACTTGGAGATGCTTCTTGTCATGTCCTCCAATGTTGGAATCTTGATAGCTGTTGTTCTTGGTCACTCCTTGGGAATCTTAGCCATGTTTCGAGCTATTTCCATTGCCAACAGGGAATCCTCTGGTCTTGAGCAAAAGGTTTGA 375 0.472 MQETMDMPNMPNMTDNGTVLFSGWPNHSAGMYTLALFSVFFLSLGMEIFSFEPPVRHPALGVAVQFVVYCFFRISFVYLEMLLVMSSNVGILIAVVLGHSLGILAMFRAISIANRESSGLEQKV 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152178g00001 124 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 4 113 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152178g00001 Stsc-Chr152178 801 1272 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152178g00001 15 104 Inorganic Solute Cotransporters AT5G59030 40.206 3.06e-13 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152178g00001 K14686 - gmx:100813144 100.523