Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152152g00001 ATGAGTGATCAAGGCACCGCAACACCTTCGCGATCTTCTCTCTCTTCCTTCCTCCCTCCACCGCAACCTCATCGCATCGCCGCTGCTTCTTCAGCCTCAACATCTGCCTCTTCTTCTTCTTCGCGCGATCCTGGGCGCCGCTTATTCGGATACACACGAAAGTTGAAGAGACTTGGTAAAGCCGTTGACCAGGAGTTGGAAAAGATCATTGCGGAGAATGAGAAGGCTGGTTCGGGTGCACAACATGCCTCGGGGGACCATAGGGATTTTATTGACATATTACTCTCCCTTGTTAAGCAACCCATTGATCCAAATGATGAGCAGAGCCAAGTCATGGATCGAACCAACGTTAAGGCCACACTCCTAGATTCTATTGCAGGGTCATTTGAAACCTCTGCAACCGTTGTTATATGGGTTTTGTCCGAGCTCTTAAAGCATCCAAGAGTGATGAGAAAGCTTCAAGATGAGCTAACTAATGTGGTTGGATTGAACAAATTTGTTCAAGAGACCCATTTAGCAAACCTAACTTACTTGGATATTGTGATCAAAGAATCACTAAGATTACATCCTCCTGGAGCAATAGTGACCCGTGCGTCAACAAAAGATGCTATAGTTAATGGTTATCGTATTAAAAAAAATACAATGATCCTAATAAACTTGTGGGCCATAGGAAGAGATCCTAAAGCATGGTCTGATAATGCTGAAGAGTATTACCCGGAGAGATTTATAGCAAACAATTGTGACTACCGTGGCTACAACTTTCATTTTATACCATTTGGTGCTGGTAGCAGAGGGTGTCCCGGAATACACCTTGGACTAACTATGGTGAAACTTGTTGTGGCTCAGATTGTACATTGCTTTAATTGGGAACTACCATCGAACATGACTCCAGATGACTTGGACATGAACGAGAAATTTGGCCTCACTCAGCCAAAAGCCAAGAACTTGCTAGCTGTGCCAACTTATCGTCTTACTTGCGAAATTCATAAGGACACACCTTGA 1002 0.4411 MSDQGTATPSRSSLSSFLPPPQPHRIAAASSASTSASSSSSRDPGRRLFGYTRKLKRLGKAVDQELEKIIAENEKAGSGAQHASGDHRDFIDILLSLVKQPIDPNDEQSQVMDRTNVKATLLDSIAGSFETSATVVIWVLSELLKHPRVMRKLQDELTNVVGLNKFVQETHLANLTYLDIVIKESLRLHPPGAIVTRASTKDAIVNGYRIKKNTMILINLWAIGRDPKAWSDNAEEYYPERFIANNCDYRGYNFHFIPFGAGSRGCPGIHLGLTMVKLVVAQIVHCFNWELPSNMTPDDLDMNEKFGLTQPKAKNLLAVPTYRLTCEIHKDTP 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152152g00001 333 MobiDBLite consensus disorder prediction 1 47 - -
Stsc152152g00001 333 Pfam Cytochrome P450 52 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152152g00001 333 Gene3D Cytochrome P450 24 322 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152152g00001 333 PRINTS P450 superfamily signature 257 266 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152152g00001 333 PRINTS P450 superfamily signature 180 191 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152152g00001 333 PRINTS P450 superfamily signature 127 144 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152152g00001 333 MobiDBLite consensus disorder prediction 1 19 - -
Stsc152152g00001 333 PANTHER CYTOCHROME P450 93A3-LIKE 48 324 - -
Stsc152152g00001 333 FunFam Predicted protein 125 318 - -
Stsc152152g00001 333 SUPERFAMILY Cytochrome P450 48 323 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152152g00001 333 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 259 268 IPR017972 GO:0005506|GO:0016705
Stsc152152g00001 333 MobiDBLite consensus disorder prediction 27 45 - -
Stsc152152g00001 333 PRINTS E-class P450 group I signature 256 266 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152152g00001 333 PRINTS E-class P450 group I signature 116 133 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152152g00001 333 PRINTS E-class P450 group I signature 266 289 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc152152g00001 333 PRINTS E-class P450 group I signature 136 162 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152152g00001 Stsc-Chr152152 5896 7857 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152152g00001 50 328 Monolignol Biosynthesis Gene Families AT5G04330 39.858 4.71e-71 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152152g00001 - - adu:107478736 451.055