Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc152141g00005 ATGTTTAAAGATACCTCAGCTTCTTCTAGAACCTTCCATCGAAGGAATCCCCAATCAGAACCAAACGAGAACGAATTCGAATCATCCTCGCAGTTTCAGAACCCAATCAATTATCCACCTCCTCGAACCCCTTTGAATTCCATACCTGACCCTTCTCAGTACCAGAAGGAAGCTCAGGACTCCGAAGCTCTTCGGCTCGGTCGGCGTTACTCTGAGAGGTTTGGGAACGGGAACGGGAGCAGCGTCTGCCTCAGCTCCGGGACTACGAGGGCTTCGGCTCGGCTCGGGAAGTCGATTTCGGAGCCGAACTCTGCGCAGAGCACGCCAGCGAGGAATGCTTCAAGCTCGAGGGTTTCGCTTGGTGGAGGAAGCAAGGGGAGAGGAGGAGTGAGTTCGTGCGCGTTGATGAGAGGGATCTCAGCTGCCAGTGGTACCGAATTGTGTACTGAAGTTCCGCATTTTGAGCTCAAAGATGATCCTTCATTTTGGATGGATCATAATGTGCAGGTTCTGATAAGAATTCGACCTTTGAATGCTGCGGAGAAGATTGTGCAAGGACATGGAAGGTGCTTGAAGCAGGAAAGTGCACAAACTTTGGTGTGGCTTGGTCACCCTGAGACCAGATTCACCTTCGATCATGTAGGGTGTGAGACTTTATCCCAGGAAAACCTGTTCAGAGTTTCAGGAGTGTCCATGGTGGAGAATTGTTTGTCTGGTTACAACAGTTGTATCTTTGCCTATGGTCAGACAGGTAGCGGCAAGACATATACCATGATGGGTGAGATTAAAGAAACAGATGGGAATCTTACCGATGATAGTGGGATAACACCTAGAGTTTTTGATTATTTGTTTACGAGGATTAAAGCGGTGTGA 873 0.488 MFKDTSASSRTFHRRNPQSEPNENEFESSSQFQNPINYPPPRTPLNSIPDPSQYQKEAQDSEALRLGRRYSERFGNGNGSSVCLSSGTTRASARLGKSISEPNSAQSTPARNASSSRVSLGGGSKGRGGVSSCALMRGISAASGTELCTEVPHFELKDDPSFWMDHNVQVLIRIRPLNAAEKIVQGHGRCLKQESAQTLVWLGHPETRFTFDHVGCETLSQENLFRVSGVSMVENCLSGYNSCIFAYGQTGSGKTYTMMGEIKETDGNLTDDSGITPRVFDYLFTRIKAV 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc152141g00005 290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 289 IPR027417 -
Stsc152141g00005 290 PANTHER KINESIN-LIKE PROTEIN KIN-12D 3 289 IPR044986 -
Stsc152141g00005 290 MobiDBLite consensus disorder prediction 1 15 - -
Stsc152141g00005 290 SMART kinesin_4 165 290 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc152141g00005 290 MobiDBLite consensus disorder prediction 93 129 - -
Stsc152141g00005 290 ProSiteProfiles Kinesin motor domain profile. 167 290 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc152141g00005 290 Gene3D Kinesin motor domain 163 290 IPR036961 -
Stsc152141g00005 290 MobiDBLite consensus disorder prediction 93 121 - -
Stsc152141g00005 290 MobiDBLite consensus disorder prediction 22 36 - -
Stsc152141g00005 290 MobiDBLite consensus disorder prediction 1 62 - -
Stsc152141g00005 290 Pfam Kinesin motor domain 173 288 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc152141g00005 Stsc-Chr152141 17588 18883 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc152141g00005 164 288 Calmodulin-binding Proteins AT5G65930 33.858 4.40e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc152141g00005 K10400 - gmx:100817801 339.732