Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc152141g00005 | ATGTTTAAAGATACCTCAGCTTCTTCTAGAACCTTCCATCGAAGGAATCCCCAATCAGAACCAAACGAGAACGAATTCGAATCATCCTCGCAGTTTCAGAACCCAATCAATTATCCACCTCCTCGAACCCCTTTGAATTCCATACCTGACCCTTCTCAGTACCAGAAGGAAGCTCAGGACTCCGAAGCTCTTCGGCTCGGTCGGCGTTACTCTGAGAGGTTTGGGAACGGGAACGGGAGCAGCGTCTGCCTCAGCTCCGGGACTACGAGGGCTTCGGCTCGGCTCGGGAAGTCGATTTCGGAGCCGAACTCTGCGCAGAGCACGCCAGCGAGGAATGCTTCAAGCTCGAGGGTTTCGCTTGGTGGAGGAAGCAAGGGGAGAGGAGGAGTGAGTTCGTGCGCGTTGATGAGAGGGATCTCAGCTGCCAGTGGTACCGAATTGTGTACTGAAGTTCCGCATTTTGAGCTCAAAGATGATCCTTCATTTTGGATGGATCATAATGTGCAGGTTCTGATAAGAATTCGACCTTTGAATGCTGCGGAGAAGATTGTGCAAGGACATGGAAGGTGCTTGAAGCAGGAAAGTGCACAAACTTTGGTGTGGCTTGGTCACCCTGAGACCAGATTCACCTTCGATCATGTAGGGTGTGAGACTTTATCCCAGGAAAACCTGTTCAGAGTTTCAGGAGTGTCCATGGTGGAGAATTGTTTGTCTGGTTACAACAGTTGTATCTTTGCCTATGGTCAGACAGGTAGCGGCAAGACATATACCATGATGGGTGAGATTAAAGAAACAGATGGGAATCTTACCGATGATAGTGGGATAACACCTAGAGTTTTTGATTATTTGTTTACGAGGATTAAAGCGGTGTGA | 873 | 0.488 | MFKDTSASSRTFHRRNPQSEPNENEFESSSQFQNPINYPPPRTPLNSIPDPSQYQKEAQDSEALRLGRRYSERFGNGNGSSVCLSSGTTRASARLGKSISEPNSAQSTPARNASSSRVSLGGGSKGRGGVSSCALMRGISAASGTELCTEVPHFELKDDPSFWMDHNVQVLIRIRPLNAAEKIVQGHGRCLKQESAQTLVWLGHPETRFTFDHVGCETLSQENLFRVSGVSMVENCLSGYNSCIFAYGQTGSGKTYTMMGEIKETDGNLTDDSGITPRVFDYLFTRIKAV | 290 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc152141g00005 | 290 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 159 | 289 | IPR027417 | - | |
Stsc152141g00005 | 290 | PANTHER | KINESIN-LIKE PROTEIN KIN-12D | 3 | 289 | IPR044986 | - | |
Stsc152141g00005 | 290 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Stsc152141g00005 | 290 | SMART | kinesin_4 | 165 | 290 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Stsc152141g00005 | 290 | MobiDBLite | consensus disorder prediction | 93 | 129 | - | - | |
Stsc152141g00005 | 290 | ProSiteProfiles | Kinesin motor domain profile. | 167 | 290 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Stsc152141g00005 | 290 | Gene3D | Kinesin motor domain | 163 | 290 | IPR036961 | - | |
Stsc152141g00005 | 290 | MobiDBLite | consensus disorder prediction | 93 | 121 | - | - | |
Stsc152141g00005 | 290 | MobiDBLite | consensus disorder prediction | 22 | 36 | - | - | |
Stsc152141g00005 | 290 | MobiDBLite | consensus disorder prediction | 1 | 62 | - | - | |
Stsc152141g00005 | 290 | Pfam | Kinesin motor domain | 173 | 288 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc152141g00005 | Stsc-Chr152141 | 17588 | 18883 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc152141g00005 | 164 | 288 | Calmodulin-binding Proteins | AT5G65930 | 33.858 | 4.40e-12 | 64.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc152141g00005 | K10400 | - | gmx:100817801 | 339.732 |