Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc152105g00005 | ATGGATTCTAATAATTTTGAAAATATAGGGCTTCCAATCCTCTCTTCTTCTCTTGAAGAAGAGGAAAATGCAAGCCTCTCCGCCATGCTTCTAAGCTTCAGCCCAATGGTCTACACTGCAGTACTTAATGCTTCACTTCAACTCAATTTATTTGATATCATATCTAACATTACTAAGGCCGCGAAAACACCTTTTAGAGGTGTTTCTGCCTCCGATGTTGCTTCAAAGCTTGATACAGCAACGAAGACACAGCATCCGAAATTGTGTCGTAGGCTTGATCGGATGCTGCGTCTTCTTGCAAGCTACTCTCTTCTCAATTGCACCACGCGCGTCAGCGAAGATGGTAGCGTTGAGAGAGTTTTTGAAGTGTCTCTTGTTGGTAAATACTTTGTTGTTAATGGTGATGAGAATGAGAATGGCTCTGTGGCTTCTTTCTCAGCATTTATGGGTCACCGAAAAGTTGTTGATGCTTTGTGA | 477 | 0.4214 | MDSNNFENIGLPILSSSLEEEENASLSAMLLSFSPMVYTAVLNASLQLNLFDIISNITKAAKTPFRGVSASDVASKLDTATKTQHPKLCRRLDRMLRLLASYSLLNCTTRVSEDGSVERVFEVSLVGKYFVVNGDENENGSVASFSAFMGHRKVVDAL | 158 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc152105g00005 | 158 | Pfam | Dimerisation domain | 41 | 100 | IPR012967 | GO:0046983 | |
Stsc152105g00005 | 158 | Gene3D | - | 13 | 130 | IPR036388 | - | |
Stsc152105g00005 | 158 | SUPERFAMILY | "Winged helix" DNA-binding domain | 20 | 134 | IPR036390 | - | |
Stsc152105g00005 | 158 | FunFam | Caffeic acid 3-O-methyltransferase | 11 | 130 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc152105g00005 | Stsc-Chr152105 | 11740 | 12216 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc152105g00005 | 20 | 156 | Monolignol Biosynthesis Gene Families | AT1G33030 | 36.496 | 3.75e-12 | 60.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc152105g00005 | - | - | mtr:11418328 | 140.969 |